(data stored in ACNUC9543 zone)

SWISSPROT: B7FZA2_PHATC

ID   B7FZA2_PHATC            Unreviewed;       665 AA.
AC   B7FZA2;
DT   10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT   10-FEB-2009, sequence version 1.
DT   08-MAY-2019, entry version 50.
DE   SubName: Full=Predicted protein {ECO:0000313|EMBL:EEC48306.1};
GN   ORFNames=PHATRDRAFT_20335 {ECO:0000313|EMBL:EEC48306.1};
OS   Phaeodactylum tricornutum (strain CCAP 1055/1).
OC   Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae;
OC   Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum.
OX   NCBI_TaxID=556484 {ECO:0000313|Proteomes:UP000000759};
RN   [1] {ECO:0000313|EMBL:EEC48306.1, ECO:0000313|Proteomes:UP000000759}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC48306.1,
RC   ECO:0000313|Proteomes:UP000000759};
RX   PubMed=18923393; DOI=10.1038/nature07410;
RA   Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA   Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E.,
RA   Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M.,
RA   Katinka M., Mock T., Valentin K., Verret F., Berges J.A., Brownlee C.,
RA   Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A.,
RA   Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M.,
RA   Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y.,
RA   Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E.,
RA   Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M.,
RA   McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C.,
RA   Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N.,
RA   Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H.,
RA   Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A.,
RA   von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S.,
RA   Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA   Grigoriev I.V.;
RT   "The Phaeodactylum genome reveals the evolutionary history of diatom
RT   genomes.";
RL   Nature 456:239-244(2008).
RN   [2] {ECO:0000313|EMBL:EEC48306.1, ECO:0000313|Proteomes:UP000000759}
RP   GENOME REANNOTATION.
RC   STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC48306.1,
RC   ECO:0000313|Proteomes:UP000000759};
RG   Diatom Consortium;
RA   Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A.,
RA   Detter J.C., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T.,
RA   Pitluck S., Rokhsar D., Bowler C.;
RL   Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CM000611; EEC48306.1; -; Genomic_DNA.
DR   RefSeq; XP_002180115.1; XM_002180079.1.
DR   STRING; 2850.Phatr20335; -.
DR   GeneID; 7201027; -.
DR   KEGG; pti:PHATRDRAFT_20335; -.
DR   HOGENOM; HOG000175261; -.
DR   InParanoid; B7FZA2; -.
DR   OrthoDB; 354219at2759; -.
DR   Proteomes; UP000000759; Chromosome 8.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR011709; DUF1605.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF04408; HA2; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
DR   PRODOM; B7FZA2.
DR   SWISS-2DPAGE; B7FZA2.
KW   ATP-binding {ECO:0000256|SAAS:SAAS01176619};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000759};
KW   Hydrolase {ECO:0000256|SAAS:SAAS01176622};
KW   Nucleotide-binding {ECO:0000256|SAAS:SAAS01176608};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000759}.
FT   DOMAIN       38    203       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      230    401       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
SQ   SEQUENCE   665 AA;  73975 MW;  6B0CE64E7CA4D608 CRC64;
     MKLFSETAKK KRHRSDSIDS LANFRQNLPV YAYRTELLRA IRSPKIVLVT ASTGSGKSTQ
     IPAYLIDSEH VMAVTQPRRV AATTLAQRVA HEHQGIVGHQ IGYRVRFDDC TRSDTQLTYV
     TDGMLLREAM VDPLLRKYSI IFLDEAHERS LQTDILLGVV QRARKSRQQS YSRRPLQIVV
     MSATLQVQTF EDFFGKENVV RIEIPGRQFP VQMLYTSVPA EDYMEATLAT ILQIHTHEEA
     GDVLVFLPGQ EEIEDLATLL RGNTVSQLLA NGVLICLLYA ALPPEAQLAA FAEKPEGCRR
     KIILATNIAE TSVTLPAIRY VVDTGKHKLR QILATGMDSL TVESVSQAQA AQRAGRAGRI
     GPGLCFRLYT EDAFERLDPD SLPEILRVGL AQVILQLKGM GVQDPTTFDF VTPPDTSSLV
     RAAKLLYALG AVNDAMELTD YGKKLAKLPL DPVFGHLLLK SAEYSCTSEM LTAVAVLSAE
     NVFYRPTTGE VIAKAAAAHR RFASHEGDLP TFLNVYQAWE REASYHSRVL HGEWCQRNFV
     SGRSLGRAYH VRQQLRSTCL RPAEKNGLGM DVNVTCGKDR ESFLKCAAAG LFLQVASRTK
     AETEIDSRGN ETVSIHPTST MFGRHPAPAC VVFTELVTTK KTYIRGVTQI REEWLHEVAP
     VFYPK
//

If you have problems or comments...

PBIL Back to PBIL home page