(data stored in SCRATCH zone)

SWISSPROT: B7ULP1_ECO27

ID   B7ULP1_ECO27            Unreviewed;       317 AA.
AC   B7ULP1;
DT   10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT   10-FEB-2009, sequence version 1.
DT   08-MAY-2019, entry version 61.
DE   SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAS08193.1};
GN   Name=ybhD {ECO:0000313|EMBL:CAS08193.1};
GN   OrderedLocusNames=E2348C_0645 {ECO:0000313|EMBL:CAS08193.1};
OS   Escherichia coli O127:H6 (strain E2348/69 / EPEC).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=574521 {ECO:0000313|EMBL:CAS08193.1, ECO:0000313|Proteomes:UP000008205};
RN   [1] {ECO:0000313|EMBL:CAS08193.1, ECO:0000313|Proteomes:UP000008205}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=E2348/69 / EPEC {ECO:0000313|Proteomes:UP000008205};
RX   PubMed=18952797; DOI=10.1128/JB.01238-08;
RA   Iguchi A., Thomson N.R., Ogura Y., Saunders D., Ooka T.,
RA   Henderson I.R., Harris D., Asadulghani M., Kurokawa K., Dean P.,
RA   Kenny B., Quail M.A., Thurston S., Dougan G., Hayashi T., Parkhill J.,
RA   Frankel G.;
RT   "Complete genome sequence and comparative genome analysis of
RT   enteropathogenic Escherichia coli O127:H6 strain E2348/69.";
RL   J. Bacteriol. 191:347-354(2009).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; FM180568; CAS08193.1; -; Genomic_DNA.
DR   RefSeq; WP_000679972.1; NC_011601.1.
DR   EnsemblBacteria; CAS08193; CAS08193; E2348C_0645.
DR   KEGG; ecg:E2348C_0645; -.
DR   HOGENOM; HOG000233514; -.
DR   OMA; KQCVIAD; -.
DR   BioCyc; ECOL574521:E2348C_RS03465-MONOMER; -.
DR   Proteomes; UP000008205; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; B7ULP1.
DR   SWISS-2DPAGE; B7ULP1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008205};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662,
KW   ECO:0000313|EMBL:CAS08193.1}; Membrane {ECO:0000256|SAM:Phobius};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     94    112       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN        3     60       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   317 AA;  36072 MW;  0092CC1DB4466380 CRC64;
     MKHELSSMKA FVILAESSSF NNAAKLLNIT QPALTRRIKK MEEDLHIQLF ERTTRKVTLT
     KAGKRLLPEA RELIKKFDET LFNIRDMNAY HRGMVTLACI PTAVFYFLPL AIGKFNELYP
     NIKVRILEQG TNNCMESVLC NESDFGINMN NVTNSSIDFT PLVNEPFVLA CRRDHPLAKK
     QLVEWQELVG YKMIGVRSSS GNRLLIEQQL ADKPWKLDWF YEVRHLSTSL GLVEAGLGIS
     ALPGLAMPHA PYSSIIGIPL VEPVIRRTLG IIRRKDAVLS PAAERFFALL INLWTDDKDN
     LWTNIVERQR HALQEIG
//

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