(data stored in SCRATCH zone)

SWISSPROT: B8BX00_THAPS

ID   B8BX00_THAPS            Unreviewed;       601 AA.
AC   B8BX00;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   11-DEC-2019, entry version 42.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EED93623.1};
GN   ORFNames=THAPSDRAFT_3163 {ECO:0000313|EMBL:EED93623.1};
OS   Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC   Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae;
OC   Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira.
OX   NCBI_TaxID=35128 {ECO:0000313|Proteomes:UP000001449};
RN   [1] {ECO:0000313|EMBL:EED93623.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED93623.1,
RC   ECO:0000313|Proteomes:UP000001449};
RX   PubMed=15459382; DOI=10.1126/science.1101156;
RA   Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA   Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA   Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA   Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA   Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA   Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA   Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA   Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA   Wilkerson F.P., Rokhsar D.S.;
RT   "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT   metabolism.";
RL   Science 306:79-86(2004).
RN   [2] {ECO:0000313|EMBL:EED93623.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED93623.1,
RC   ECO:0000313|Proteomes:UP000001449};
RX   PubMed=18923393; DOI=10.1038/nature07410;
RA   Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA   Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA   Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA   Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA   Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA   Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA   Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA   La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA   Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA   Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA   Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA   Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA   Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA   Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA   Grigoriev I.V.;
RT   "The Phaeodactylum genome reveals the evolutionary history of diatom
RT   genomes.";
RL   Nature 456:239-244(2008).
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DR   EMBL; CM000640; EED93623.1; -; Genomic_DNA.
DR   RefSeq; XP_002288187.1; XM_002288151.1.
DR   EnsemblProtists; EED93623; EED93623; THAPSDRAFT_3163.
DR   GeneID; 7441733; -.
DR   KEGG; tps:THAPSDRAFT_3163; -.
DR   HOGENOM; HOG000079756; -.
DR   InParanoid; B8BX00; -.
DR   Proteomes; UP000001449; Chromosome 3.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR001214; SET_dom.
DR   Pfam; PF00856; SET; 1.
DR   PROSITE; PS50280; SET; 2.
PE   4: Predicted;
DR   PRODOM; B8BX00.
DR   SWISS-2DPAGE; B8BX00.
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        48..68
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          108..248
FT                   /note="SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50280"
FT   DOMAIN          279..419
FT                   /note="SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50280"
FT   REGION          1..40
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   601 AA;  67096 MW;  34FBDBE53DABD13C CRC64;
     MAKPKKNKAL SAYLQRPTSR DHLKKGGVVP TPSSDGSFDN GDGTSTNVIM TVSFALIAVL
     VIGLFQSLDW GISDTNVCKI SASSDDGVCV SDTGPNEMDI DQHAINTCSL VMAPSGIPNG
     GWGVFTMKDR KRGERVSEQG DVIIHLPDPN PHTSLAMRRL IWDYLWDGQL TYGHYEGLRV
     VSVAPGMGML VNGVNKNPNL IPNQPTVDNG GLKRGLEPGA GAITHHYNYT WNVDRDLNAG
     DELFVEYGQG WFKERGFETQ VVPTKWNVSH LSNVGHCLDN IVPGKSLVKG AGRGAFASRD
     LKEGTVVAPA PLIALSSTSL EMAKERQDGS IITSTQLLKN YCFGHPDSSL LLYPYSHGVN
     LINHNSKSPN VKLRWWSESI SYFNTPILEL QQFSTAQLMM EIVATRPIQK GEELYLDYGA
     EWTTAWKNHV ESWSPSEEDI THVSSDVMNG DAKYDVLWTE KEQQSTPYPT DVFTSCYYEY
     SNYRHPNKEH SETKSFAEWK PHKGVMSARN LRPCLIVHRE LEDFSTSRHL YTVRVMNRPG
     LGEAERIPKG HFHIVAKVPR EAIIFSDKTY TSDQHLLAAF RKEIGLGELF PEQWKDLLER
     G
//

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