(data stored in SCRATCH zone)

SWISSPROT: B8BX09_THAPS

ID   B8BX09_THAPS            Unreviewed;       199 AA.
AC   B8BX09;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   11-DEC-2019, entry version 50.
DE   SubName: Full=RM4, ribosomal protein 4 {ECO:0000313|EMBL:EED93627.1};
DE   Flags: Fragment;
GN   Name=RM4 {ECO:0000313|EMBL:EED93627.1};
GN   ORFNames=THAPSDRAFT_261661 {ECO:0000313|EMBL:EED93627.1};
OS   Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC   Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae;
OC   Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira.
OX   NCBI_TaxID=35128 {ECO:0000313|Proteomes:UP000001449};
RN   [1] {ECO:0000313|EMBL:EED93627.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED93627.1,
RC   ECO:0000313|Proteomes:UP000001449};
RX   PubMed=15459382; DOI=10.1126/science.1101156;
RA   Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA   Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA   Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA   Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA   Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA   Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA   Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA   Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA   Wilkerson F.P., Rokhsar D.S.;
RT   "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT   metabolism.";
RL   Science 306:79-86(2004).
RN   [2] {ECO:0000313|EMBL:EED93627.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED93627.1,
RC   ECO:0000313|Proteomes:UP000001449};
RX   PubMed=18923393; DOI=10.1038/nature07410;
RA   Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA   Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA   Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA   Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA   Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA   Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA   Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA   La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA   Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA   Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA   Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA   Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA   Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA   Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA   Grigoriev I.V.;
RT   "The Phaeodactylum genome reveals the evolutionary history of diatom
RT   genomes.";
RL   Nature 456:239-244(2008).
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DR   EMBL; CM000640; EED93627.1; -; Genomic_DNA.
DR   RefSeq; XP_002288191.1; XM_002288155.1.
DR   STRING; 35128.Thaps261661; -.
DR   EnsemblProtists; EED93627; EED93627; THAPSDRAFT_261661.
DR   GeneID; 7441738; -.
DR   KEGG; tps:THAPSDRAFT_261661; -.
DR   eggNOG; KOG1624; Eukaryota.
DR   eggNOG; COG0088; LUCA.
DR   HOGENOM; HOG000248767; -.
DR   InParanoid; B8BX09; -.
DR   KO; K02926; -.
DR   Proteomes; UP000001449; Chromosome 3.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   Gene3D; 3.40.1370.10; -; 1.
DR   InterPro; IPR002136; Ribosomal_L4/L1e.
DR   InterPro; IPR023574; Ribosomal_L4_dom_sf.
DR   InterPro; IPR013005; Ribosomal_uL4/L1e.
DR   PANTHER; PTHR10746; PTHR10746; 1.
DR   Pfam; PF00573; Ribosomal_L4; 1.
DR   SUPFAM; SSF52166; SSF52166; 1.
DR   TIGRFAMs; TIGR03953; rplD_bact; 1.
PE   4: Predicted;
DR   PRODOM; B8BX09.
DR   SWISS-2DPAGE; B8BX09.
KW   Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW   Ribonucleoprotein {ECO:0000313|EMBL:EED93627.1};
KW   Ribosomal protein {ECO:0000313|EMBL:EED93627.1}.
FT   REGION          50..88
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EED93627.1"
FT   NON_TER         199
FT                   /evidence="ECO:0000313|EMBL:EED93627.1"
SQ   SEQUENCE   199 AA;  21724 MW;  11646F4C12B65619 CRC64;
     LGSIHLSAHT FGCDPIRVDI LHRCVVYQRN KRRGKRNAGA RTKTIHEVSG SGRKVRNQKG
     GGVARAGHSR PAHWRGGAKA HGPKGSVQDY TTKLNKKVRK MGVRHALSQK LLEGNLIVMG
     DLNAKSHKTK ELEEALGRFG IAGKKGTVYG GLNVNLKVAS GNLFKVKVMN QLGTNVYDLL
     KHEKLVLSLS AVKALEERL
//

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