(data stored in ACNUC29543 zone)

SWISSPROT: B8CDM4_THAPS

ID   B8CDM4_THAPS            Unreviewed;       222 AA.
AC   B8CDM4;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   08-MAY-2019, entry version 43.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EED88640.1};
DE   Flags: Fragment;
GN   ORFNames=THAPSDRAFT_42543 {ECO:0000313|EMBL:EED88640.1};
OS   Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC   Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae;
OC   Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae;
OC   Thalassiosira.
OX   NCBI_TaxID=35128 {ECO:0000313|Proteomes:UP000001449};
RN   [1] {ECO:0000313|EMBL:EED88640.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED88640.1,
RC   ECO:0000313|Proteomes:UP000001449};
RX   PubMed=15459382; DOI=10.1126/science.1101156;
RA   Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA   Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M.,
RA   Brzezinski M.A., Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S.,
RA   Detter J.C., Glavina T., Goodstein D., Hadi M.Z., Hellsten U.,
RA   Hildebrand M., Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N.,
RA   Lau W.W., Lane T.W., Larimer F.W., Lippmeier J.C., Lucas S.,
RA   Medina M., Montsant A., Obornik M., Parker M.S., Palenik B.,
RA   Pazour G.J., Richardson P.M., Rynearson T.A., Saito M.A.,
RA   Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A., Wilkerson F.P.,
RA   Rokhsar D.S.;
RT   "The genome of the diatom Thalassiosira pseudonana: ecology,
RT   evolution, and metabolism.";
RL   Science 306:79-86(2004).
RN   [2] {ECO:0000313|EMBL:EED88640.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED88640.1,
RC   ECO:0000313|Proteomes:UP000001449};
RX   PubMed=18923393; DOI=10.1038/nature07410;
RA   Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA   Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E.,
RA   Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M.,
RA   Katinka M., Mock T., Valentin K., Verret F., Berges J.A., Brownlee C.,
RA   Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A.,
RA   Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M.,
RA   Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y.,
RA   Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E.,
RA   Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M.,
RA   McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C.,
RA   Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N.,
RA   Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H.,
RA   Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A.,
RA   von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S.,
RA   Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA   Grigoriev I.V.;
RT   "The Phaeodactylum genome reveals the evolutionary history of diatom
RT   genomes.";
RL   Nature 456:239-244(2008).
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DR   EMBL; CM000650; EED88640.1; -; Genomic_DNA.
DR   RefSeq; XP_002294285.1; XM_002294249.1.
DR   STRING; 35128.Thaps42543; -.
DR   EnsemblProtists; EED88640; EED88640; THAPSDRAFT_42543.
DR   GeneID; 7450291; -.
DR   KEGG; tps:THAPSDRAFT_42543; -.
DR   eggNOG; ENOG410IIVX; Eukaryota.
DR   eggNOG; COG3145; LUCA.
DR   HOGENOM; HOG000207105; -.
DR   InParanoid; B8CDM4; -.
DR   Proteomes; UP000001449; Chromosome 15.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0051747; F:cytosine C-5 DNA demethylase activity; IBA:GO_Central.
DR   GO; GO:0043734; F:DNA-N1-methyladenine dioxygenase activity; IBA:GO_Central.
DR   GO; GO:0008198; F:ferrous iron binding; IBA:GO_Central.
DR   GO; GO:0006307; P:DNA dealkylation involved in DNA repair; IBA:GO_Central.
DR   GO; GO:0035511; P:oxidative DNA demethylation; IBA:GO_Central.
DR   Gene3D; 2.60.120.590; -; 1.
DR   InterPro; IPR027450; AlkB-like.
DR   InterPro; IPR037151; AlkB-like_sf.
DR   InterPro; IPR005123; Oxoglu/Fe-dep_dioxygenase.
DR   Pfam; PF13532; 2OG-FeII_Oxy_2; 1.
DR   PROSITE; PS51471; FE2OG_OXY; 1.
PE   4: Predicted;
DR   PRODOM; B8CDM4.
DR   SWISS-2DPAGE; B8CDM4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001449};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001449}.
FT   DOMAIN      124    222       Fe2OG dioxygenase. {ECO:0000259|PROSITE:
FT                                PS51471}.
FT   NON_TER     222    222       {ECO:0000313|EMBL:EED88640.1}.
SQ   SEQUENCE   222 AA;  25137 MW;  92BFD708DAC77401 CRC64;
     MDEFLIPLRT PCVYHDPNFL PTDEATAAYQ DLLENTPWEK TAKINRWVTL MELPKNASNV
     DEKEEADGDD TDEKKGTGYR YRDAPGETII GFPPTVYKLK LLAEEWYNSK QTNDGTANAE
     AKVEFNVCLL NYYQDGTQRI GWHSDREELG RTTPIASISL GATRSFLIRS QTDGVHDRAS
     LDLENGSIVV MENVCQREYV HSVPKEGEVV GGRINLTFRC KQ
//

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