(data stored in SCRATCH zone)

SWISSPROT: YQBD_BACSU

ID   YQBD_BACSU              Reviewed;         322 AA.
AC   P45920;
DT   01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT   07-JUL-2009, sequence version 2.
DT   11-DEC-2019, entry version 93.
DE   RecName: Full=Uncharacterized protein YqbD;
GN   Name=yqbD; OrderedLocusNames=BSU26150;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168 / JH642;
RX   PubMed=7704261; DOI=10.1099/13500872-141-2-323;
RA   Takemaru K., Mizuno M., Sato T., Takeuchi M., Kobayashi Y.;
RT   "Complete nucleotide sequence of a skin element excised by DNA
RT   rearrangement during sporulation in Bacillus subtilis.";
RL   Microbiology 141:323-327(1995).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168 / JH642;
RX   PubMed=8969508; DOI=10.1099/13500872-142-11-3103;
RA   Mizuno M., Masuda S., Takemaru K., Hosono S., Sato T., Takeuchi M.,
RA   Kobayashi Y.;
RT   "Systematic sequencing of the 283 kb 210 degrees-232 degrees region of the
RT   Bacillus subtilis genome containing the skin element and many sporulation
RT   genes.";
RL   Microbiology 142:3103-3111(1996).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
RN   [4]
RP   SEQUENCE REVISION TO 59.
RX   PubMed=19383706; DOI=10.1099/mic.0.027839-0;
RA   Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A.,
RA   Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.;
RT   "From a consortium sequence to a unified sequence: the Bacillus subtilis
RT   168 reference genome a decade later.";
RL   Microbiology 155:1758-1775(2009).
RN   [5]
RP   IDENTIFICATION.
RX   PubMed=7489895; DOI=10.1016/0378-1119(95)00636-k;
RA   Medigue C., Moszer I., Viari A., Danchin A.;
RT   "Analysis of a Bacillus subtilis genome fragment using a co-operative
RT   computer system prototype.";
RL   Gene 165:GC37-GC51(1995).
CC   -!- INTERACTION:
CC       O31501:swrC; NbExp=3; IntAct=EBI-5242682, EBI-5242442;
CC       P96706:ydgH; NbExp=3; IntAct=EBI-5242682, EBI-5242915;
CC   -!- SIMILARITY: To B.subtilis XkdF. {ECO:0000305}.
DR   EMBL; D32216; BAA06937.1; -; Genomic_DNA.
DR   EMBL; D84432; BAA12399.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB14556.2; -; Genomic_DNA.
DR   PIR; G69946; G69946.
DR   RefSeq; NP_390492.2; NC_000964.3.
DR   RefSeq; WP_003229921.1; NZ_JNCM01000036.1.
DR   SMR; P45920; -.
DR   IntAct; P45920; 32.
DR   STRING; 224308.BSU26150; -.
DR   PaxDb; P45920; -.
DR   PRIDE; P45920; -.
DR   EnsemblBacteria; CAB14556; CAB14556; BSU26150.
DR   GeneID; 937736; -.
DR   KEGG; bsu:BSU26150; -.
DR   PATRIC; fig|224308.179.peg.2841; -.
DR   eggNOG; ENOG4112BBE; LUCA.
DR   HOGENOM; HOG000011120; -.
DR   OMA; KITHVSY; -.
DR   BioCyc; BSUB:BSU26150-MONOMER; -.
DR   Proteomes; UP000001570; Chromosome.
DR   InterPro; IPR027924; XkdF.
DR   Pfam; PF14550; Peptidase_S78_2; 1.
PE   1: Evidence at protein level;
DR   PRODOM; P45920.
DR   SWISS-2DPAGE; P45920.
KW   Coiled coil; Reference proteome.
FT   CHAIN           1..322
FT                   /note="Uncharacterized protein YqbD"
FT                   /id="PRO_0000049755"
FT   COILED          205..286
FT                   /evidence="ECO:0000255"
FT   CONFLICT        59
FT                   /note="E -> D (in Ref. 1; BAA06937 and 2; BAA12399)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   322 AA;  36262 MW;  CC33F6E2711A000A CRC64;
     MPRELVNAKI THVSYVDKAA NQKQFFIVKS EKQPDFQKEV RILAKEADEQ KLVYGIVYEP
     DTVDAHGDFM TAAEIEKAAH GFLKDARQID KQHDFQGGVG EVVESYVAPA DFEMNGETIK
     KGSWVLVTKA SEEVWEQIKK GEITGYSMAG TAETIEKQEK PVSQEKTDEK GLFNLLKNFF
     VGKQQQSYEE PVAKAGRKFS ASNLQEIKNA HAALGNLLSQ VETKEGEEEM TSEEVTKSIQ
     EALEPIKKRL ETLEKEEELN KKDKEKEEET EKEGEKLKKA ISEAVQPLAD RIEAIEKSRG
     TSKQTEESGS EQVQKSIWSG LF
//

If you have problems or comments...

PBIL Back to PBIL home page