(data stored in ACNUC7421 zone)

SWISSPROT: YDCH_BACSU

ID   YDCH_BACSU              Reviewed;         147 AA.
AC   P96625; Q797K2;
DT   20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1997, sequence version 1.
DT   11-DEC-2019, entry version 110.
DE   RecName: Full=Uncharacterized HTH-type transcriptional regulator YdcH;
GN   Name=ydcH; OrderedLocusNames=BSU04770;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168;
RA   Kasahara Y., Nakai S., Lee S., Sadaie Y., Ogasawara N.;
RT   "A 148 kbp sequence of the region between 35 and 47 degree of the Bacillus
RT   subtilis genome.";
RL   Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
DR   EMBL; AB001488; BAA19314.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB12284.1; -; Genomic_DNA.
DR   PIR; F69773; F69773.
DR   RefSeq; NP_388358.1; NC_000964.3.
DR   RefSeq; WP_003246643.1; NZ_JNCM01000031.1.
DR   SMR; P96625; -.
DR   STRING; 224308.BSU04770; -.
DR   PaxDb; P96625; -.
DR   PRIDE; P96625; -.
DR   EnsemblBacteria; CAB12284; CAB12284; BSU04770.
DR   GeneID; 939928; -.
DR   KEGG; bsu:BSU04770; -.
DR   PATRIC; fig|224308.179.peg.506; -.
DR   eggNOG; ENOG4105RV9; Bacteria.
DR   eggNOG; COG1846; LUCA.
DR   HOGENOM; HOG000244325; -.
DR   InParanoid; P96625; -.
DR   OMA; DPMMTSQ; -.
DR   PhylomeDB; P96625; -.
DR   BioCyc; BSUB:BSU04770-MONOMER; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0044212; F:transcription regulatory region DNA binding; IBA:GO_Central.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR000835; HTH_MarR-typ.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF01047; MarR; 1.
DR   SMART; SM00347; HTH_MARR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50995; HTH_MARR_2; 1.
PE   4: Predicted;
DR   PRODOM; P96625.
DR   SWISS-2DPAGE; P96625.
KW   DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..147
FT                   /note="Uncharacterized HTH-type transcriptional regulator
FT                   YdcH"
FT                   /id="PRO_0000360729"
FT   DOMAIN          11..147
FT                   /note="HTH marR-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00345"
FT   DNA_BIND        61..84
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00345"
SQ   SEQUENCE   147 AA;  16629 MW;  4A3A9D6670798105 CRC64;
     MEWHSKFSGP NTSPGFLLWQ ATQSWQRKVG KALAEFDLTH VQFVLLTSCK YMIAHGETVT
     QKKLASFSQT NIMMVSEVVR TLEKKGFIER SKNPQDKREV LLSLTEIGGE KVTAALPIVE
     KIDQAFFAAA MKKENFLSGL QELLKHE
//

If you have problems or comments...

PBIL Back to PBIL home page