(data stored in ACNUC7421 zone)

SWISSPROT: YDCI_BACSU

ID   YDCI_BACSU              Reviewed;         719 AA.
AC   O31489; P96626; P96627;
DT   03-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2003, sequence version 2.
DT   11-DEC-2019, entry version 108.
DE   RecName: Full=Uncharacterized protein YdcI;
GN   Name=ydcI; Synonyms=ydcJ; OrderedLocusNames=BSU04780;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168;
RA   Kasahara Y., Nakai S., Lee S., Sadaie Y., Ogasawara N.;
RT   "A 148 kbp sequence of the region between 35 and 47 degree of the Bacillus
RT   subtilis genome.";
RL   Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
RN   [3]
RP   SEQUENCE REVISION TO C-TERMINUS.
RX   PubMed=19383706; DOI=10.1099/mic.0.027839-0;
RA   Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A.,
RA   Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.;
RT   "From a consortium sequence to a unified sequence: the Bacillus subtilis
RT   168 reference genome a decade later.";
RL   Microbiology 155:1758-1775(2009).
CC   -!- CAUTION: Was originally (Ref.1) thought to be two genes, ydcI and ydcJ.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAA19315.1; Type=Frameshift; Evidence={ECO:0000305};
CC       Sequence=BAA19316.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC       Sequence=BAA19316.1; Type=Frameshift; Evidence={ECO:0000305};
DR   EMBL; AB001488; BAA19315.1; ALT_FRAME; Genomic_DNA.
DR   EMBL; AB001488; BAA19316.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AL009126; CAB12285.2; -; Genomic_DNA.
DR   PIR; G69773; G69773.
DR   RefSeq; NP_388359.2; NC_000964.3.
DR   RefSeq; WP_003246556.1; NZ_JNCM01000031.1.
DR   SMR; O31489; -.
DR   STRING; 224308.BSU04780; -.
DR   jPOST; O31489; -.
DR   PaxDb; O31489; -.
DR   PRIDE; O31489; -.
DR   EnsemblBacteria; CAB12285; CAB12285; BSU04780.
DR   GeneID; 939932; -.
DR   KEGG; bsu:BSU04780; -.
DR   PATRIC; fig|224308.179.peg.507; -.
DR   eggNOG; COG2183; LUCA.
DR   HOGENOM; HOG000270498; -.
DR   InParanoid; O31489; -.
DR   KO; K06959; -.
DR   OMA; RWAWRTR; -.
DR   PhylomeDB; O31489; -.
DR   BioCyc; BSUB:BSU04780-MONOMER; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IBA:GO_Central.
DR   Gene3D; 1.10.10.650; -; 1.
DR   Gene3D; 1.10.3500.10; -; 1.
DR   Gene3D; 3.30.420.140; -; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF47781; SSF47781; 2.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
DR   PRODOM; O31489.
DR   SWISS-2DPAGE; O31489.
KW   Coiled coil; Reference proteome.
FT   CHAIN           1..719
FT                   /note="Uncharacterized protein YdcI"
FT                   /id="PRO_0000388341"
FT   DOMAIN          649..718
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   COILED          64..100
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   719 AA;  81410 MW;  F4110D22B316755F CRC64;
     METSALLKQQ IAKEIGLSQK HVESVIRLLE DGNTVPFIAR YRKEQTGSMD EVQIQTISER
     WQYIQNLNQR KEEVIRLIAE QDKLTDNLKR KIEQSVKLQE VEDLYRPYKQ KRKTKATVAK
     SKGLEPLADY ILTLPQDDHL AATADQYISE EKEVFTREEA IEGAKHIIAE QISDEPTFRK
     WIRQETFKRG TIKSAAGKSA DTDEKNVYEM YYEYEEPIAK VVPHRVLAMN RGEKEDILKV
     AIEPPADHIK AYLEKQIIKN RSTSVREILQ ETIEDSYKRL IQPAIEREIR KELSEKADEQ
     AIHIFSENLR KLLLQPPMKG KTVLGVDPAF RTGCKLAVSD ETGKVLKIDV IYPHAPVNKT
     KEAHEKVKKI LEQYQVEMVA IGNGTASRET EQFIVNVLRD MPRKIYYVIV NEAGASVYSA
     SELAREEFPD LKVEERSAVS IARRLQDPLA ELVKIDPKSV GVGQYQHDVS QKRLNESLRF
     VVETVVNQVG VNVNTASAAL LQYVAGLSKS VAGNVVKKRE EIGKFSNRKE LKDIPRLGAK
     TYEQCIGFLR VQEGTEPLDR TGIHPESYKE TKALLKKLGL STEHIGTAEL KDKINQLALS
     ETAKELGIGE ITLKDICEQL TRPERDPRDK VPKPLLKTDV LQLEDLKEGM ELQGTVRNVV
     DFGAFVDIGV KQDGLVHISK LSNQFVKHPL DVVSVGDIVT VWVDGVDVQK GRVSLSMVK
//

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