(data stored in ACNUC7421 zone)

SWISSPROT: YDEA_BACSU

ID   YDEA_BACSU              Reviewed;         197 AA.
AC   P96658; Q797I9;
DT   03-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1997, sequence version 1.
DT   11-DEC-2019, entry version 91.
DE   RecName: Full=Uncharacterized protease YdeA;
DE            EC=3.2.-.-;
GN   Name=ydeA; OrderedLocusNames=BSU05110;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168;
RA   Kasahara Y., Nakai S., Lee S., Sadaie Y., Ogasawara N.;
RT   "A 148 kbp sequence of the region between 35 and 47 degree of the Bacillus
RT   subtilis genome.";
RL   Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
RN   [3]
RP   X-RAY CRYSTALLOGRAPHY (2.06 ANGSTROMS) OF 2-196.
RG   New York structural genomics research consortium (NYSGRC);
RT   "Crystal structure of a protein of unknown function from Bacillus
RT   subtilis.";
RL   Submitted (FEB-2009) to the PDB data bank.
CC   -!- SIMILARITY: Belongs to the peptidase C56 family. {ECO:0000305}.
DR   EMBL; AB001488; BAA19347.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB12318.1; -; Genomic_DNA.
DR   PIR; C69777; C69777.
DR   RefSeq; NP_388392.1; NC_000964.3.
DR   RefSeq; WP_003234249.1; NZ_JNCM01000031.1.
DR   PDB; 3F5D; X-ray; 2.06 A; A=2-196.
DR   PDBsum; 3F5D; -.
DR   SMR; P96658; -.
DR   STRING; 224308.BSU05110; -.
DR   PaxDb; P96658; -.
DR   PRIDE; P96658; -.
DR   DNASU; 939914; -.
DR   EnsemblBacteria; CAB12318; CAB12318; BSU05110.
DR   GeneID; 939914; -.
DR   KEGG; bsu:BSU05110; -.
DR   PATRIC; fig|224308.179.peg.545; -.
DR   eggNOG; ENOG4108V4B; Bacteria.
DR   eggNOG; COG0693; LUCA.
DR   HOGENOM; HOG000015209; -.
DR   InParanoid; P96658; -.
DR   OMA; ICGAVDY; -.
DR   PhylomeDB; P96658; -.
DR   BioCyc; BSUB:BSU05110-MONOMER; -.
DR   EvolutionaryTrace; P96658; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR   GO; GO:0036524; F:protein deglycase activity; IBA:GO_Central.
DR   GO; GO:0106046; P:guanine deglycation, glyoxal removal; IBA:GO_Central.
DR   GO; GO:0036529; P:protein deglycation, glyoxal removal; IBA:GO_Central.
DR   Gene3D; 3.40.50.880; -; 1.
DR   InterPro; IPR029062; Class_I_gatase-like.
DR   InterPro; IPR002818; DJ-1/PfpI.
DR   Pfam; PF01965; DJ-1_PfpI; 1.
DR   SUPFAM; SSF52317; SSF52317; 1.
PE   1: Evidence at protein level;
DR   PRODOM; P96658.
DR   SWISS-2DPAGE; P96658.
KW   3D-structure; Hydrolase; Protease; Reference proteome.
FT   CHAIN           1..197
FT                   /note="Uncharacterized protease YdeA"
FT                   /id="PRO_0000388349"
FT   DOMAIN          ?29..?166
FT                   /note="PfpI endopeptidase"
FT   ACT_SITE        98
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000250"
FT   STRAND          2..7
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   STRAND          10..12
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   HELIX           18..25
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   STRAND          30..43
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   STRAND          48..50
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   STRAND          52..54
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   STRAND          63..67
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   HELIX           78..89
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   STRAND          94..97
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   HELIX           99..106
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   TURN            107..112
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   HELIX           120..123
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   STRAND          138..143
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   STRAND          146..149
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   HELIX           154..164
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   HELIX           170..182
FT                   /evidence="ECO:0000244|PDB:3F5D"
FT   HELIX           184..191
FT                   /evidence="ECO:0000244|PDB:3F5D"
SQ   SEQUENCE   197 AA;  22454 MW;  952181570C6209DA CRC64;
     MKKALFLILD QYADWEGVYL ASALNQREDW SVHTVSLDPI VSSIGGFKTS VDYIIGLEPA
     NFNLLVMIGG DSWSNDNKKL LHFVKTAFQK NIPIAAICGA VDFLAKNGLL NNHSHTGNFV
     YLWKDYKQYK PISSFVEKQA VRDKNLVTAN GTAPIEFTNL ILEMIDFDTP ENIEKMMYMN
     RYGFYHFCDK YGNPFVD
//

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