(data stored in ACNUC7421 zone)

SWISSPROT: YDEE_BACSU

ID   YDEE_BACSU              Reviewed;         290 AA.
AC   P96662; Q797I6;
DT   20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1997, sequence version 1.
DT   11-DEC-2019, entry version 129.
DE   RecName: Full=Uncharacterized HTH-type transcriptional regulator YdeE;
GN   Name=ydeE; OrderedLocusNames=BSU05170;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168;
RA   Kasahara Y., Nakai S., Lee S., Sadaie Y., Ogasawara N.;
RT   "A 148 kbp sequence of the region between 35 and 47 degree of the Bacillus
RT   subtilis genome.";
RL   Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
DR   EMBL; AB001488; BAA19352.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB12324.1; -; Genomic_DNA.
DR   PIR; G69777; G69777.
DR   RefSeq; NP_388398.1; NC_000964.3.
DR   RefSeq; WP_003234236.1; NZ_JNCM01000031.1.
DR   SMR; P96662; -.
DR   STRING; 224308.BSU05170; -.
DR   PaxDb; P96662; -.
DR   PRIDE; P96662; -.
DR   EnsemblBacteria; CAB12324; CAB12324; BSU05170.
DR   GeneID; 938117; -.
DR   KEGG; bsu:BSU05170; -.
DR   PATRIC; fig|224308.179.peg.552; -.
DR   eggNOG; ENOG41086D8; Bacteria.
DR   eggNOG; COG2207; LUCA.
DR   eggNOG; COG3708; LUCA.
DR   HOGENOM; HOG000085330; -.
DR   InParanoid; P96662; -.
DR   KO; K13653; -.
DR   OMA; SCWSRWQ; -.
DR   PhylomeDB; P96662; -.
DR   BioCyc; BSUB:BSU05170-MONOMER; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 3.20.80.10; -; 1.
DR   InterPro; IPR010499; AraC_E-bd.
DR   InterPro; IPR029442; GyrI-like.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR011256; Reg_factor_effector_dom_sf.
DR   InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR   Pfam; PF06445; GyrI-like; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   PRINTS; PR00032; HTHARAC.
DR   SMART; SM00871; AraC_E_bind; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF55136; SSF55136; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; P96662.
DR   SWISS-2DPAGE; P96662.
KW   Cytoplasm; DNA-binding; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..290
FT                   /note="Uncharacterized HTH-type transcriptional regulator
FT                   YdeE"
FT                   /id="PRO_0000360678"
FT   DOMAIN          8..106
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT   DNA_BIND        25..46
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT   DNA_BIND        73..96
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
SQ   SEQUENCE   290 AA;  33257 MW;  78068BBDC139A434 CRC64;
     MDLLKSMNRA LKYIEENLTN DIDFQEAAKL AFCSEYHFKR MFSFLAGISL SEYIRRRRLT
     LAAFELKDSN VKVIDIAIKY GYNSPDSFAR AFQNLHGINP SKARFNGHSL KAYPRMTFQL
     TIKGGNEMNY RIEEKEAFRI VGIKKRVPII FKGINPEIAS MWESLDEKAI NKLKELSNVA
     PSGLISASTN FSEGRTEENG ELDHYIGAAT TKRCPDNFSR LEVPASTWAV FESIGPFPDT
     LQEVWGRIYS EWFPSSNYEQ IEGPEILWNE HKDVTSPSFK SEIWIPITKK
//

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