(data stored in ACNUC7421 zone)

SWISSPROT: YDFF_BACSU

ID   YDFF_BACSU              Reviewed;         226 AA.
AC   P96683; Q797G8;
DT   20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1997, sequence version 1.
DT   11-DEC-2019, entry version 123.
DE   RecName: Full=Uncharacterized HTH-type transcriptional regulator YdfF;
GN   Name=ydfF; OrderedLocusNames=BSU05390;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168;
RA   Kasahara Y., Nakai S., Lee S., Sadaie Y., Ogasawara N.;
RT   "A 148 kbp sequence of the region between 35 and 47 degree of the Bacillus
RT   subtilis genome.";
RL   Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
DR   EMBL; AB001488; BAA19373.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB12346.1; -; Genomic_DNA.
DR   PIR; D69780; D69780.
DR   RefSeq; NP_388420.1; NC_000964.3.
DR   RefSeq; WP_003244115.1; NZ_JNCM01000031.1.
DR   SMR; P96683; -.
DR   STRING; 224308.BSU05390; -.
DR   PaxDb; P96683; -.
DR   PRIDE; P96683; -.
DR   EnsemblBacteria; CAB12346; CAB12346; BSU05390.
DR   GeneID; 938084; -.
DR   KEGG; bsu:BSU05390; -.
DR   PATRIC; fig|224308.179.peg.576; -.
DR   eggNOG; ENOG4108ZHR; Bacteria.
DR   eggNOG; COG0640; LUCA.
DR   HOGENOM; HOG000257923; -.
DR   InParanoid; P96683; -.
DR   OMA; CPCLDWS; -.
DR   PhylomeDB; P96683; -.
DR   BioCyc; BSUB:BSU05390-MONOMER; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0097063; F:cadmium ion sensor activity; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR   GO; GO:0032791; F:lead ion binding; IBA:GO_Central.
DR   GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR   GO; GO:0046686; P:response to cadmium ion; IBA:GO_Central.
DR   GO; GO:0010288; P:response to lead ion; IBA:GO_Central.
DR   CDD; cd00090; HTH_ARSR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011991; ArsR-like_HTH.
DR   InterPro; IPR001845; HTH_ArsR_DNA-bd_dom.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PRINTS; PR00778; HTHARSR.
DR   SMART; SM00418; HTH_ARSR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50987; HTH_ARSR_2; 1.
PE   4: Predicted;
DR   PRODOM; P96683.
DR   SWISS-2DPAGE; P96683.
KW   DNA-binding; Reference proteome; Repressor; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..226
FT                   /note="Uncharacterized HTH-type transcriptional regulator
FT                   YdfF"
FT                   /id="PRO_0000360996"
FT   DOMAIN          1..92
FT                   /note="HTH arsR-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00340"
FT   DNA_BIND        32..55
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00340"
SQ   SEQUENCE   226 AA;  25617 MW;  96C44D638D2E1ABD CRC64;
     MNPNIAKISS LLSDPSRSSI LLSLMDGRIH PAGELAYLAN IKPQTASFHL NKLLEAKLIS
     VEKHGRHRYY RLADSDAANV IEQLLHIAPK AKVKSLKESK EKKDLHFART CYDHLAGYVG
     VQMAHSLVEQ GMLKKVDLNF EVTSEGALFF SKLGINEEQQ RNKRRAFARC CLDWSERQHH
     IAGALGNALL VRMLEEEWIV RMPKTRAIRI TQSGKIAFEK HLNVKI
//

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