(data stored in ACNUC7421 zone)

SWISSPROT: YBEY_ECO57

ID   YBEY_ECO57              Reviewed;         155 AA.
AC   Q8XBK1;
DT   28-NOV-2002, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2002, sequence version 1.
DT   05-JUL-2017, entry version 92.
DE   RecName: Full=Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};
GN   Name=ybeY {ECO:0000255|HAMAP-Rule:MF_00009};
GN   OrderedLocusNames=Z0808, ECs0697;
OS   Escherichia coli O157:H7.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83334;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=O157:H7 / EDL933 / ATCC 700927 / EHEC;
RX   PubMed=11206551; DOI=10.1038/35054089;
RA   Perna N.T., Plunkett G. III, Burland V., Mau B., Glasner J.D.,
RA   Rose D.J., Mayhew G.F., Evans P.S., Gregor J., Kirkpatrick H.A.,
RA   Posfai G., Hackett J., Klink S., Boutin A., Shao Y., Miller L.,
RA   Grotbeck E.J., Davis N.W., Lim A., Dimalanta E.T., Potamousis K.,
RA   Apodaca J., Anantharaman T.S., Lin J., Yen G., Schwartz D.C.,
RA   Welch R.A., Blattner F.R.;
RT   "Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.";
RL   Nature 409:529-533(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=O157:H7 / Sakai / RIMD 0509952 / EHEC;
RX   PubMed=11258796; DOI=10.1093/dnares/8.1.11;
RA   Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K.,
RA   Han C.-G., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T.,
RA   Iida T., Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T.,
RA   Kuhara S., Shiba T., Hattori M., Shinagawa H.;
RT   "Complete genome sequence of enterohemorrhagic Escherichia coli
RT   O157:H7 and genomic comparison with a laboratory strain K-12.";
RL   DNA Res. 8:11-22(2001).
CC   -!- FUNCTION: Single strand-specific metallo-endoribonuclease involved
CC       in late-stage 70S ribosome quality control and in maturation of
CC       the 3' terminus of the 16S rRNA. {ECO:0000255|HAMAP-
CC       Rule:MF_00009}.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_00009};
CC       Note=Binds 1 zinc ion. {ECO:0000255|HAMAP-Rule:MF_00009};
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00009}.
CC   -!- SIMILARITY: Belongs to the endoribonuclease YbeY family.
CC       {ECO:0000255|HAMAP-Rule:MF_00009}.
DR   EMBL; AE005174; AAG54992.1; -; Genomic_DNA.
DR   EMBL; BA000007; BAB34120.1; -; Genomic_DNA.
DR   PIR; A90716; A90716.
DR   PIR; D85566; D85566.
DR   RefSeq; NP_308724.1; NC_002695.1.
DR   RefSeq; WP_000084465.1; NZ_MWVM01000011.1.
DR   ProteinModelPortal; Q8XBK1; -.
DR   SMR; Q8XBK1; -.
DR   STRING; 155864.Z0808; -.
DR   EnsemblBacteria; AAG54992; AAG54992; Z0808.
DR   EnsemblBacteria; BAB34120; BAB34120; BAB34120.
DR   GeneID; 917058; -.
DR   KEGG; ece:Z0808; -.
DR   KEGG; ecs:ECs0697; -.
DR   PATRIC; fig|386585.9.peg.811; -.
DR   eggNOG; ENOG4105KGE; Bacteria.
DR   eggNOG; COG0319; LUCA.
DR   HOGENOM; HOG000132870; -.
DR   KO; K07042; -.
DR   Proteomes; UP000000558; Chromosome.
DR   Proteomes; UP000002519; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR   Gene3D; 3.40.390.30; -; 1.
DR   HAMAP; MF_00009; Endoribonucl_YbeY; 1.
DR   InterPro; IPR023091; MetalPrtase_cat_dom_prd.
DR   InterPro; IPR002036; YbeY.
DR   InterPro; IPR020549; YbeY_CS.
DR   Pfam; PF02130; UPF0054; 1.
DR   TIGRFAMs; TIGR00043; TIGR00043; 1.
DR   PROSITE; PS01306; UPF0054; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q8XBK1.
DR   SWISS-2DPAGE; Q8XBK1.
KW   Complete proteome; Cytoplasm; Endonuclease; Hydrolase; Metal-binding;
KW   Nuclease; Ribosome biogenesis; rRNA processing; Zinc.
FT   CHAIN         1    155       Endoribonuclease YbeY.
FT                                /FTId=PRO_0000102450.
FT   METAL       114    114       Zinc; catalytic. {ECO:0000255|HAMAP-
FT                                Rule:MF_00009}.
FT   METAL       118    118       Zinc; catalytic. {ECO:0000255|HAMAP-
FT                                Rule:MF_00009}.
FT   METAL       124    124       Zinc; catalytic. {ECO:0000255|HAMAP-
FT                                Rule:MF_00009}.
SQ   SEQUENCE   155 AA;  17558 MW;  D48AD04636F846BE CRC64;
     MSQVILDLQL ACEDNSGLPE ESQFQTWLNA VIPQFQEESE VTIRVVDTAE SHSLNLTYRG
     KDKPTNVLSF PFEVPPGMEM SLLGDLVICR QMVEKEAQEQ GKPLEAHWAH MVVHGSLHLL
     GYDHIEDDEA EEMEALETEI MLALGYEDPY IAEKE
//

If you have problems or comments...

PBIL Back to PBIL home page