(data stored in ACNUC1104 zone)

SWISSPROT: C0ZN65_RHOE4

ID   C0ZN65_RHOE4            Unreviewed;       297 AA.
AC   C0ZN65;
DT   26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   26-MAY-2009, sequence version 1.
DT   16-JAN-2019, entry version 66.
DE   SubName: Full=Putative LysR family transcriptional regulator {ECO:0000313|EMBL:BAH31117.1};
GN   OrderedLocusNames=RER_04090 {ECO:0000313|EMBL:BAH31117.1};
OS   Rhodococcus erythropolis (strain PR4 / NBRC 100887).
OC   Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
OC   Rhodococcus.
OX   NCBI_TaxID=234621 {ECO:0000313|EMBL:BAH31117.1, ECO:0000313|Proteomes:UP000002204};
RN   [1] {ECO:0000313|Proteomes:UP000002204}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PR4 / NBRC 100887 {ECO:0000313|Proteomes:UP000002204};
RA   Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S.,
RA   Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.;
RT   "Comparison of the complete genome sequences of Rhodococcus
RT   erythropolis PR4 and Rhodococcus opacus B4.";
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:BAH31117.1, ECO:0000313|Proteomes:UP000002204}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PR4 / NBRC 100887 {ECO:0000313|Proteomes:UP000002204};
RX   PubMed=16423019; DOI=10.1111/j.1462-2920.2005.00899.x;
RA   Sekine M., Tanikawa S., Omata S., Saito M., Fujisawa T., Tsukatani N.,
RA   Tajima T., Sekigawa T., Kosugi H., Matsuo Y., Nishiko R., Imamura K.,
RA   Ito M., Narita H., Tago S., Fujita N., Harayama S.;
RT   "Sequence analysis of three plasmids harboured in Rhodococcus
RT   erythropolis strain PR4.";
RL   Environ. Microbiol. 8:334-346(2006).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AP008957; BAH31117.1; -; Genomic_DNA.
DR   RefSeq; WP_020905920.1; NC_012490.1.
DR   STRING; 234621.RER_04090; -.
DR   EnsemblBacteria; BAH31117; BAH31117; RER_04090.
DR   GeneID; 31540267; -.
DR   KEGG; rer:RER_04090; -.
DR   PATRIC; fig|234621.6.peg.850; -.
DR   eggNOG; ENOG4105DDX; Bacteria.
DR   eggNOG; ENOG41102KE; LUCA.
DR   HOGENOM; HOG000233518; -.
DR   OMA; MREPIDL; -.
DR   BioCyc; RERY234621:GHDE-418-MONOMER; -.
DR   Proteomes; UP000002204; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd00090; HTH_ARSR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011991; ArsR-like_HTH.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; C0ZN65.
DR   SWISS-2DPAGE; C0ZN65.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002204};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        1     58       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   297 AA;  31882 MW;  9149DD8FFBAB9F34 CRC64;
     MDATRLRILR ELADRGTVGA TALALSMTPS AVSQQLKILG REAGVSLLEP DGRTLRLTDA
     GRALVLRADD VVAALDRAAD EMASYRGSPR GKVRVAFFPS GAALLLPGVL TALKNSDVDI
     DAHDVDKPAS AVPGLLADHD VILTHRDERG AETSFPRVSV QPLMREPIDL VLRPDHPLAE
     QDSVRLEQLA DENWISVRGG FPVDDVLLSV ASVTGVQPRV AHRINDFRVI EELVAAGHGV
     ALMPRYAITH PGVSRKPVAG VRAARVYELA TRLHIDRSPA IGVVLDAFRD VARAVGE
//

If you have problems or comments...

PBIL Back to PBIL home page