(data stored in ACNUC7421 zone)

SWISSPROT: C1ASL4_RHOOB

ID   C1ASL4_RHOOB            Unreviewed;       265 AA.
AC   C1ASL4;
DT   26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   26-MAY-2009, sequence version 1.
DT   08-MAY-2019, entry version 71.
DE   SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:BAH48463.1};
GN   OrderedLocusNames=ROP_02160 {ECO:0000313|EMBL:BAH48463.1};
OS   Rhodococcus opacus (strain B4).
OC   Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
OC   Rhodococcus.
OX   NCBI_TaxID=632772 {ECO:0000313|EMBL:BAH48463.1, ECO:0000313|Proteomes:UP000002212};
RN   [1] {ECO:0000313|EMBL:BAH48463.1, ECO:0000313|Proteomes:UP000002212}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=B4 {ECO:0000313|EMBL:BAH48463.1,
RC   ECO:0000313|Proteomes:UP000002212};
RA   Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S.,
RA   Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.;
RT   "Comparison of the complete genome sequences of Rhodococcus
RT   erythropolis PR4 and Rhodococcus opacus B4.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|SAAS:SAAS00611284}.
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DR   EMBL; AP011115; BAH48463.1; -; Genomic_DNA.
DR   RefSeq; WP_012687472.1; NC_012522.1.
DR   EnsemblBacteria; BAH48463; BAH48463; ROP_02160.
DR   KEGG; rop:ROP_02160; -.
DR   PATRIC; fig|632772.20.peg.249; -.
DR   eggNOG; ENOG4105E65; Bacteria.
DR   eggNOG; COG1191; LUCA.
DR   HOGENOM; HOG000270270; -.
DR   KO; K03090; -.
DR   OMA; NEPMEDI; -.
DR   OrthoDB; 1857862at2; -.
DR   BioCyc; ROPA632772:GH0Q-215-MONOMER; -.
DR   Proteomes; UP000002212; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88659; SSF88659; 2.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02980; SigBFG; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C1ASL4.
DR   SWISS-2DPAGE; C1ASL4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002212};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       46    114       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      128    198       Sigma70_r3. {ECO:0000259|Pfam:PF04539}.
FT   DOMAIN      211    260       Sigma70_r4. {ECO:0000259|Pfam:PF04545}.
SQ   SEQUENCE   265 AA;  29431 MW;  1798BD4D181388B8 CRC64;
     MSPVSERSER HRPGRDDYKD VAPAVARLRI LEESSGEASA LRDEIITRCL PLADHIARRF
     GGRGEAHEDL LQVARLGLVK AVDRFDPDRG FDFVSYAVPT IMGEVRRYFR DTGWSMRVPR
     RMQELHALIA KAVDELSQEL GRSPSASEIA AELELDVREV SEGLLAKNAY QTLSMDAAMG
     DDPDDLPLAE TLGEEDPELA NVESHASVRP ALEKLPPLER RVLMLRFFGS MTQTEIAQRV
     GVSQMQVSRI LARTLSGLRE QLGGG
//

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