(data stored in ACNUC7421 zone)

SWISSPROT: C1AR93_RHOOB

ID   C1AR93_RHOOB            Unreviewed;       349 AA.
AC   C1AR93;
DT   26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   26-MAY-2009, sequence version 1.
DT   07-JUN-2017, entry version 56.
DE   SubName: Full=RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH48570.1};
GN   OrderedLocusNames=ROP_03230 {ECO:0000313|EMBL:BAH48570.1};
OS   Rhodococcus opacus (strain B4).
OC   Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
OC   Rhodococcus.
OX   NCBI_TaxID=632772 {ECO:0000313|EMBL:BAH48570.1, ECO:0000313|Proteomes:UP000002212};
RN   [1] {ECO:0000313|EMBL:BAH48570.1, ECO:0000313|Proteomes:UP000002212}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=B4 {ECO:0000313|EMBL:BAH48570.1,
RC   ECO:0000313|Proteomes:UP000002212};
RA   Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S.,
RA   Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.;
RT   "Comparison of the complete genome sequences of Rhodococcus
RT   erythropolis PR4 and Rhodococcus opacus B4.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS00565917}.
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DR   EMBL; AP011115; BAH48570.1; -; Genomic_DNA.
DR   RefSeq; WP_012687577.1; NC_012522.1.
DR   ProteinModelPortal; C1AR93; -.
DR   STRING; 632772.ROP_03230; -.
DR   EnsemblBacteria; BAH48570; BAH48570; ROP_03230.
DR   KEGG; rop:ROP_03230; -.
DR   PATRIC; fig|632772.20.peg.367; -.
DR   eggNOG; ENOG4108QP2; Bacteria.
DR   eggNOG; COG1595; LUCA.
DR   HOGENOM; HOG000220479; -.
DR   KO; K03088; -.
DR   OMA; RELHAHC; -.
DR   OrthoDB; POG091H04ZH; -.
DR   BioCyc; ROPA632772:GH0Q-322-MONOMER; -.
DR   Proteomes; UP000002212; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR009959; Cyclase_SnoaL-like_dom.
DR   InterPro; IPR032710; NTF2-like_dom.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014305; RNA_pol_sigma-G_actinobac.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   Pfam; PF12680; SnoaL_2; 1.
DR   SUPFAM; SSF54427; SSF54427; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR   TIGRFAMs; TIGR02960; SigX5; 1.
PE   3: Inferred from homology;
DR   PRODOM; C1AR93.
DR   SWISS-2DPAGE; C1AR93.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002212};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       35    101       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      156    205       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
FT   DOMAIN      233    329       Cyclase_SnoaL-like_dom.
FT                                {ECO:0000259|Pfam:PF12680}.
SQ   SEQUENCE   349 AA;  37732 MW;  F7760287270C74BB CRC64;
     MSDNSVRTPH ASADAEDDDL ARARDGDDAA FTRLVGPLRR ELHAHCYRML GSSHDADDAL
     QDALLRAWRG VAKFEGRSTL RSWLYTVATR TCLDAVESRG RRALPVDLGP SSDRAVVGDV
     PLTEVAWLGP YADAGLVAGV AGPAARYEQR EAVELAFVAA LQHLPGNQRA ALLLFEVLGF
     SAAEIAAVME TTTASVNSAL QRARAIVANK IPSVTQSRTL REIDDAHLRA LVAGYSTALE
     RGDADALVAL LTEDVTWSMP PMGHWYRGLA AVTDFAVRVP LTGCGSWRHL PVGANGQPAV
     AFYLWDEDAG THLRWSITVL TLRGTKIAEL TSFIGPEHFE PFDLPQSMP
//

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