(data stored in ACNUC10821 zone)

SWISSPROT: C8U321_ECO10

ID   C8U321_ECO10            Unreviewed;       155 AA.
AC   C8U321;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   08-MAY-2019, entry version 54.
DE   RecName: Full=Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00349114};
DE            EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00349018};
GN   Name=ybeY {ECO:0000256|HAMAP-Rule:MF_00009,
GN   ECO:0000313|EMBL:BAI29529.1};
GN   OrderedLocusNames=ECO103_0666 {ECO:0000313|EMBL:BAI29529.1};
OS   Escherichia coli O103:H2 (strain 12009 / EHEC).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=585395 {ECO:0000313|EMBL:BAI29529.1, ECO:0000313|Proteomes:UP000000959};
RN   [1] {ECO:0000313|EMBL:BAI29529.1, ECO:0000313|Proteomes:UP000000959}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=12009 / EHEC {ECO:0000313|Proteomes:UP000000959};
RX   PubMed=19815525; DOI=10.1073/pnas.0903585106;
RA   Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K.,
RA   Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M.,
RA   Hayashi T.;
RT   "Comparative genomics reveal the mechanism of the parallel evolution
RT   of O157 and non-O157 enterohemorrhagic Escherichia coli.";
RL   Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009).
CC   -!- FUNCTION: Single strand-specific metallo-endoribonuclease involved
CC       in late-stage 70S ribosome quality control and in maturation of
CC       the 3' terminus of the 16S rRNA. {ECO:0000256|HAMAP-Rule:MF_00009,
CC       ECO:0000256|SAAS:SAAS00349030}.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000256|HAMAP-
CC         Rule:MF_00009};
CC       Note=Binds 1 zinc ion. {ECO:0000256|HAMAP-Rule:MF_00009};
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00009,
CC       ECO:0000256|SAAS:SAAS00349021}.
CC   -!- SIMILARITY: Belongs to the endoribonuclease YbeY family.
CC       {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00543484}.
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DR   EMBL; AP010958; BAI29529.1; -; Genomic_DNA.
DR   RefSeq; WP_000084469.1; NC_013353.1.
DR   SMR; C8U321; -.
DR   EnsemblBacteria; BAI29529; BAI29529; ECO103_0666.
DR   KEGG; eoh:ECO103_0666; -.
DR   HOGENOM; HOG000132870; -.
DR   KO; K07042; -.
DR   OMA; LGYDHMN; -.
DR   BioCyc; ECOL585395:ECO103_RS03470-MONOMER; -.
DR   Proteomes; UP000000959; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004521; F:endoribonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.40.390.30; -; 1.
DR   HAMAP; MF_00009; Endoribonucl_YbeY; 1.
DR   InterPro; IPR023091; MetalPrtase_cat_dom_sf_prd.
DR   InterPro; IPR002036; YbeY.
DR   InterPro; IPR020549; YbeY_CS.
DR   Pfam; PF02130; UPF0054; 1.
DR   TIGRFAMs; TIGR00043; TIGR00043; 1.
DR   PROSITE; PS01306; UPF0054; 1.
PE   3: Inferred from homology;
DR   PRODOM; C8U321.
DR   SWISS-2DPAGE; C8U321.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000959};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00009,
KW   ECO:0000256|SAAS:SAAS00426868};
KW   Endonuclease {ECO:0000256|HAMAP-Rule:MF_00009,
KW   ECO:0000256|SAAS:SAAS00023076};
KW   Hydrolase {ECO:0000256|HAMAP-Rule:MF_00009,
KW   ECO:0000256|SAAS:SAAS00426854};
KW   Metal-binding {ECO:0000256|HAMAP-Rule:MF_00009,
KW   ECO:0000256|SAAS:SAAS00426917};
KW   Nuclease {ECO:0000256|HAMAP-Rule:MF_00009,
KW   ECO:0000256|SAAS:SAAS00426828};
KW   Ribosome biogenesis {ECO:0000256|HAMAP-Rule:MF_00009,
KW   ECO:0000256|SAAS:SAAS00426913};
KW   rRNA processing {ECO:0000256|HAMAP-Rule:MF_00009,
KW   ECO:0000256|SAAS:SAAS00023226};
KW   Zinc {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00426909}.
FT   METAL       114    114       Zinc; catalytic. {ECO:0000256|HAMAP-Rule:
FT                                MF_00009}.
FT   METAL       118    118       Zinc; catalytic. {ECO:0000256|HAMAP-Rule:
FT                                MF_00009}.
FT   METAL       124    124       Zinc; catalytic. {ECO:0000256|HAMAP-Rule:
FT                                MF_00009}.
SQ   SEQUENCE   155 AA;  17526 MW;  C0DAC40266F846A5 CRC64;
     MSQVILDLQL ACEDNSGLPE ESQFQTWLNA VIPQFQEESE VTIRVVDTAE SHSLNLTYRG
     KDKPTNVLSF PFEVPPGMEM SLLGDLVICR QVVEKEAQEQ GKPLEAHWAH MVVHGSLHLL
     GYDHIEDDEA EEMEALETEI MLALGYEDPY IAEKE
//

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