(data stored in ACNUC10043 zone)

SWISSPROT: D1YWG3_METPS

ID   D1YWG3_METPS            Unreviewed;       215 AA.
AC   D1YWG3;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   11-DEC-2019, entry version 46.
DE   RecName: Full=S4 RNA-binding domain-containing protein {ECO:0000259|PROSITE:PS50889};
GN   OrderedLocusNames=MCP_0713 {ECO:0000313|EMBL:BAI60785.1};
OS   Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /
OS   SANAE).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanocellales; Methanocellaceae; Methanocella.
OX   NCBI_TaxID=304371 {ECO:0000313|EMBL:BAI60785.1, ECO:0000313|Proteomes:UP000001882};
RN   [1] {ECO:0000313|Proteomes:UP000001882}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17711 / JCM 13418 / NBRC 101707 / SANAE
RC   {ECO:0000313|Proteomes:UP000001882};
RX   PubMed=21829548; DOI=10.1371/journal.pone.0022898;
RA   Sakai S., Takaki Y., Shimamura S., Sekine M., Tajima T., Kosugi H.,
RA   Ichikawa N., Tasumi E., Hiraki A.T., Shimizu A., Kato Y., Nishiko R.,
RA   Mori K., Fujita N., Imachi H., Takai K.;
RT   "Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella
RT   paludicola, the first cultivated representative of the order
RT   Methanocellales.";
RL   PLoS ONE 6:E22898-E22898(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AP011532; BAI60785.1; -; Genomic_DNA.
DR   STRING; 304371.MCP_0713; -.
DR   EnsemblBacteria; BAI60785; BAI60785; MCP_0713.
DR   KEGG; mpd:MCP_0713; -.
DR   eggNOG; arCOG00080; Archaea.
DR   eggNOG; COG1189; LUCA.
DR   HOGENOM; HOG000114428; -.
DR   KO; K06442; -.
DR   OMA; EFSRDFR; -.
DR   BioCyc; MPAL304371:GI7G-730-MONOMER; -.
DR   Proteomes; UP000001882; Chromosome.
DR   GO; GO:0008168; F:methyltransferase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0032259; P:methylation; IEA:InterPro.
DR   CDD; cd00165; S4; 1.
DR   Gene3D; 3.10.290.10; -; 1.
DR   InterPro; IPR004538; Haemolysin_A/TlyA.
DR   InterPro; IPR002877; rRNA_MeTrfase_FtsJ_dom.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   InterPro; IPR036986; S4_RNA-bd_sf.
DR   InterPro; IPR029063; SAM-dependent_MTases.
DR   PANTHER; PTHR32319:SF0; PTHR32319:SF0; 1.
DR   Pfam; PF01728; FtsJ; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   SUPFAM; SSF53335; SSF53335; 1.
DR   PROSITE; PS50889; S4; 1.
PE   4: Predicted;
DR   PRODOM; D1YWG3.
DR   SWISS-2DPAGE; D1YWG3.
KW   Reference proteome {ECO:0000313|Proteomes:UP000001882};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT   DOMAIN          1..65
FT                   /note="S4 RNA-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50889"
SQ   SEQUENCE   215 AA;  23686 MW;  E3FFA0FE2AF053B7 CRC64;
     MRLDEYLVSE GLVPSRSRAK RLIEKGQVKV DGKAVLKPSQ KVEYGRKVAI EGEDMPEGYF
     KLKGIQEASG ILRPGDVVLD IGSSAGGFLM FASGIASRVV GIEFSREFLE PLSNVEKEYP
     GVKVMFGDAF RMDLAALGGP YDVILNDMTV EPLTSIEVLK RFLPLLKEHG RIVQVVKLGP
     RGTPEPMIKK LAEAGLKIQK VIRPQKMEAY IVAEK
//

If you have problems or comments...

PBIL Back to PBIL home page