(data stored in SCRATCH zone)

SWISSPROT: D4YWW6_SPHJU

ID   D4YWW6_SPHJU            Unreviewed;       921 AA.
AC   D4YWW6;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   08-MAY-2019, entry version 51.
DE   SubName: Full=TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAI94848.1};
GN   OrderedLocusNames=SJA_C1-00140 {ECO:0000313|EMBL:BAI94848.1};
OS   Sphingobium japonicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26
OS   / NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI94848.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI94848.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S
RC   {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane
CC       {ECO:0000256|RuleBase:RU003357, ECO:0000256|SAAS:SAAS00994622}.
CC   -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC       {ECO:0000256|RuleBase:RU003357, ECO:0000256|SAAS:SAAS00977698}.
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DR   EMBL; AP010803; BAI94848.1; -; Genomic_DNA.
DR   RefSeq; WP_013038697.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-00140; -.
DR   EnsemblBacteria; BAI94848; BAI94848; SJA_C1-00140.
DR   GeneID; 29271724; -.
DR   KEGG; sjp:SJA_C1-00140; -.
DR   eggNOG; ENOG4105QJW; Bacteria.
DR   eggNOG; ENOG410XNXJ; LUCA.
DR   HOGENOM; HOG000252053; -.
DR   OMA; PRNGVGF; -.
DR   BioCyc; SJAP452662:GHEL-14-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   Gene3D; 2.40.170.20; -; 2.
DR   InterPro; IPR012910; Plug_dom.
DR   InterPro; IPR039423; TonB-dep_rcpt.
DR   InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR   InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR   InterPro; IPR010917; TonB_rcpt_CS.
DR   PANTHER; PTHR32552; PTHR32552; 1.
DR   Pfam; PF07715; Plug; 1.
DR   Pfam; PF00593; TonB_dep_Rec; 1.
DR   PROSITE; PS01156; TONB_DEPENDENT_REC_2; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YWW6.
DR   SWISS-2DPAGE; D4YWW6.
KW   Cell outer membrane {ECO:0000256|SAAS:SAAS00994642};
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Membrane {ECO:0000256|RuleBase:RU003357,
KW   ECO:0000256|SAAS:SAAS00994636};
KW   Receptor {ECO:0000256|SAAS:SAAS00977773, ECO:0000313|EMBL:BAI94848.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   TonB box {ECO:0000256|RuleBase:RU003357,
KW   ECO:0000256|SAAS:SAAS00977785};
KW   Transport {ECO:0000256|SAAS:SAAS00977740}.
FT   SIGNAL        1     24       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        25    921       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5003067270.
FT   DOMAIN       49    156       Plug. {ECO:0000259|Pfam:PF07715}.
FT   DOMAIN      367    918       TonB_dep_Rec. {ECO:0000259|Pfam:PF00593}.
SQ   SEQUENCE   921 AA;  97446 MW;  95DF695A72C8B851 CRC64;
     MKKSLWLISV GAIALGSSVP VAWAQDSGSA VDSENVNIIV TATRRASPLS DVPIAVSAVT
     SQAMQNSGAT DIRALNQLAP SLLLSSTGTE ANASARIRGI GTVGDNPGLE SSVAVFIDGV
     YRSRTGAGLN ELGEIERVEV LRGPQGTLFG RNASAGLINI ISKAPEFTLG GKAEVTYGNY
     DYWRLAGRVT GPVTDKLALS LDGVWSKRDG FYDLVNASGA KVGETNDRDR YFLRGQALFQ
     PNDALSIRLI GDYTHRDESC CGAPYIETRE RRPVAGGGYS TAPFNRIAAI LAGQGSVFGA
     DPYDRDLTIT AGRNYVSKLK DWGVSGEINY DLGGTKLTSI TAYRHYKSQD YGDYDYGGAD
     LLYRDPNTHR QFKTFTQELR AQGSAFNDVL DWLVGGYYAH EKLTLEDNIV FGADYGRFAA
     CRLMAGASVN SNLTAAQLAA CGSGLATQAL ITGTQAQLNA GLILAGVPAL QAGAISTGLG
     NGLRALAAIP SGTGDVASLY HQKSENWALF THNIVHITSQ LDLTLGLRYT HESKRFSADF
     NNNNATCAAL QASSLPAIAT NAQLGSAAAL AGGILTLGCL GNGSTGLNAL DLNDKISDGE
     FSGTAVLSWK PIQELLVYGS YSKGYKAGGY NLDRFQLGST GLNAVPAVFA PRTNADVTSL
     RFAAEKVDAF EVGLKYTQPK WSANIAAFRQ EFKNFQLNTF NGTSFVVQNI NGCDGALTAA
     RTCAGGDVGP GLISQGVELE LSATPARNVR VAGGFTYARA KFANRLVGSS NGTVPLDPAL
     FLLPGSINSQ APEVVTTVSA AWTPSLGSNG LSALFYVDGR MSSDFNTGSD LFPEKRQDGY
     AVFNARVGIR GPQQRWAVEF WGQNIFNQDY SQVAFSTPLQ SSSPSTSTTG QFALGAPMAN
     QLISAYLAEP RTYGITLRGS F
//

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