(data stored in SCRATCH zone)

SWISSPROT: D4YWW9_SPHJU

ID   D4YWW9_SPHJU            Unreviewed;       803 AA.
AC   D4YWW9;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   08-MAY-2019, entry version 50.
DE   SubName: Full=Lhr-like helicase {ECO:0000313|EMBL:BAI94851.1};
GN   Name=lhr {ECO:0000313|EMBL:BAI94851.1};
GN   OrderedLocusNames=SJA_C1-00170 {ECO:0000313|EMBL:BAI94851.1};
OS   Sphingobium japonicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26
OS   / NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI94851.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI94851.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S
RC   {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
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DR   EMBL; AP010803; BAI94851.1; -; Genomic_DNA.
DR   RefSeq; WP_013038699.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-00170; -.
DR   EnsemblBacteria; BAI94851; BAI94851; SJA_C1-00170.
DR   GeneID; 29271727; -.
DR   KEGG; sjp:SJA_C1-00170; -.
DR   eggNOG; ENOG4107QRT; Bacteria.
DR   eggNOG; COG1201; LUCA.
DR   HOGENOM; HOG000036041; -.
DR   KO; K03724; -.
DR   OMA; VVDEWHE; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd00079; HELICc; 1.
DR   InterPro; IPR013701; DEAD/DEAH_assoc.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR026362; DEXH_lig_assoc.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR017170; Lhr-like_ATP-dep_RNA_helic_prd.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF08494; DEAD_assoc; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   PIRSF; PIRSF037307; Lhr-like_helic_prd; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   TIGRFAMs; TIGR04121; DEXH_lig_assoc; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
DR   PRODOM; D4YWW9.
DR   SWISS-2DPAGE; D4YWW9.
KW   ATP-binding {ECO:0000313|EMBL:BAI94851.1};
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Helicase {ECO:0000313|EMBL:BAI94851.1};
KW   Hydrolase {ECO:0000313|EMBL:BAI94851.1};
KW   Nucleotide-binding {ECO:0000313|EMBL:BAI94851.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753}.
FT   DOMAIN       28    198       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      239    382       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
SQ   SEQUENCE   803 AA;  88781 MW;  9A73354198C3CB52 CRC64;
     MNQRLPEPLE QWFTSRGWTP RRHQTDMLAA ARSGDHALLV APTGAGKTLA GFLPTLTDLI
     ENPGEGLHTL YVSPLKALAV DVRRNLLTPI EEMDLPIRVE TRTGDTPSDR KARQRARPPQ
     ILLTTPESLS LLLSYADSFL MFAGLKTVII DEVHAFATQK RGDILNLSLS RLQSINPGLR
     RVALSATVAD VDAYRAWLAP DGDIGAVTPV MGEAGADPHV AILIPDGRIP WSGHSGKYAA
     KQVMEEIERR ATTLVFCNTR GLAELIFQSL WSVNEANLPI AIHHGSLSIE ARRKVESAMA
     AGKLRALVAT ASLDLGVDWG NVDCVIQMGA PKGSSRLLQR IGRANHRLDT PSEAILIPGN
     RFEYLEARAA LDAVEAGERD TDDFRPGSLD VLAQHVMGLA CAAPFREEEL LAEIRSATPY
     GALTEEAFAN VLHFIEGGGY ALRAYDRFKR LTLGADGLWR VSHPRFVQQH RLNAGIIVDQ
     PVLDVRFANG RKLGTVEEGF AATLRPGDSF FFSGIALEAV RMDTTDLVVR ATSKQARIPT
     WGGTRMAMST RLADRVRHFL AEPDQWGRFP DDVRDWLEVQ KYRSALPEPG QLLIETFPHE
     GRHYLVCYSF EGWNAHQSLG MLLTRRMDAQ GLMPMGFVSN DYALAVYGLK PVTDPQSLFS
     ADILDHEFIQ WVEQSSLLKR AFRDVAVISG LIERQHPGKR KTGRQVTFST DLIYDVLRKY
     QPDHLLLKAA WADARARMTD VGRLGDLIDR ASATMLHVDL DRVSPLAVPV LILIGREQVA
     QHAVEDALLI EAEALVAEAM RPD
//

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