(data stored in ACNUC7421 zone)

SWISSPROT: D4YX46_SPHJU

ID   D4YX46_SPHJU            Unreviewed;       253 AA.
AC   D4YX46;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 40.
DE   RecName: Full=Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601};
DE            EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};
GN   OrderedLocusNames=SJA_C1-00940 {ECO:0000313|EMBL:BAI94928.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI94928.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI94928.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- FUNCTION: Specifically methylates the N3 position of the uracil
CC       ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully
CC       assembled 30S ribosomal subunit. {ECO:0000256|PIRNR:PIRNR015601}.
CC   -!- CATALYTIC ACTIVITY: S-adenosyl-L-methionine + uracil(1498) in 16S
CC       rRNA = S-adenosyl-L-homocysteine + N(3)-methyluracil(1498) in 16S
CC       rRNA. {ECO:0000256|PIRNR:PIRNR015601}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|PIRNR:PIRNR015601}.
CC   -!- SIMILARITY: Belongs to the RNA methyltransferase RsmE family.
CC       {ECO:0000256|PIRNR:PIRNR015601}.
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DR   EMBL; AP010803; BAI94928.1; -; Genomic_DNA.
DR   ProteinModelPortal; D4YX46; -.
DR   STRING; 452662.SJA_C1-00940; -.
DR   EnsemblBacteria; BAI94928; BAI94928; SJA_C1-00940.
DR   KEGG; sjp:SJA_C1-00940; -.
DR   eggNOG; ENOG4105QF0; Bacteria.
DR   eggNOG; COG1385; LUCA.
DR   HOGENOM; HOG000015266; -.
DR   KO; K09761; -.
DR   OMA; IGPEGCF; -.
DR   OrthoDB; POG091H02MI; -.
DR   BioCyc; SJAP452662:GHEL-100-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR   Gene3D; 3.40.1280.10; -; 1.
DR   InterPro; IPR029028; Alpha/beta_knot_MTases.
DR   InterPro; IPR015947; PUA-like_domain.
DR   InterPro; IPR006700; rRNA_ssu_MeTrfase-E.
DR   InterPro; IPR029026; tRNA_m1G_MTases_N.
DR   PANTHER; PTHR30027; PTHR30027; 1.
DR   Pfam; PF04452; Methyltrans_RNA; 1.
DR   PIRSF; PIRSF015601; MTase_slr0722; 1.
DR   SUPFAM; SSF75217; SSF75217; 1.
DR   SUPFAM; SSF88697; SSF88697; 1.
DR   TIGRFAMs; TIGR00046; TIGR00046; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YX46.
DR   SWISS-2DPAGE; D4YX46.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Cytoplasm {ECO:0000256|PIRNR:PIRNR015601};
KW   Methyltransferase {ECO:0000256|PIRNR:PIRNR015601};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   rRNA processing {ECO:0000256|PIRNR:PIRNR015601};
KW   S-adenosyl-L-methionine {ECO:0000256|PIRNR:PIRNR015601};
KW   Transferase {ECO:0000256|PIRNR:PIRNR015601}.
SQ   SEQUENCE   253 AA;  27812 MW;  3B7D8D2DA3A779A2 CRC64;
     MMDFLMTATP AWPPQSAPRL HVETQLGEGV SVPVDGNPAH YLISVMRVKA DDIVLLFDGR
     SGEWAAKARD IRKRDLVLEV VSRTRPPEDV PDFWLCCAPI RKGRIDLVAE KACELGVARL
     QPVLTRRAVV DKLNLDRLYA HLVEAAEQCG RTALPELGQM AKLDALLRDW PEGRWLFFAD
     ESGGEPLADT LKAHPGPAAF LIGPEGGFDP AEREAIRRVA KAIPVSLGPR ILRAETAAIA
     ATSAWMTING DWR
//

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