(data stored in ACNUC7421 zone)

SWISSPROT: D4YX90_SPHJU

ID   D4YX90_SPHJU            Unreviewed;       792 AA.
AC   D4YX90;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 44.
DE   SubName: Full=TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAI94972.1};
GN   OrderedLocusNames=SJA_C1-01380 {ECO:0000313|EMBL:BAI94972.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI94972.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI94972.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane
CC       {ECO:0000256|RuleBase:RU003357, ECO:0000256|SAAS:SAAS00558041}.
CC   -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC       {ECO:0000256|RuleBase:RU003357, ECO:0000256|SAAS:SAAS00558036}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AP010803; BAI94972.1; -; Genomic_DNA.
DR   STRING; 452662.SJA_C1-01380; -.
DR   EnsemblBacteria; BAI94972; BAI94972; SJA_C1-01380.
DR   KEGG; sjp:SJA_C1-01380; -.
DR   eggNOG; ENOG4105F28; Bacteria.
DR   eggNOG; COG1629; LUCA.
DR   HOGENOM; HOG000051314; -.
DR   OMA; WRITSEL; -.
DR   OrthoDB; POG091H0I94; -.
DR   BioCyc; SJAP452662:GHEL-144-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0004872; F:receptor activity; IEA:InterPro.
DR   GO; GO:0006810; P:transport; IEA:InterPro.
DR   Gene3D; 2.170.130.10; -; 1.
DR   Gene3D; 2.40.170.20; -; 1.
DR   InterPro; IPR012910; Plug_dom.
DR   InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR   InterPro; IPR010917; TonB_rcpt_CS.
DR   Pfam; PF07715; Plug; 1.
DR   Pfam; PF00593; TonB_dep_Rec; 1.
DR   PROSITE; PS01156; TONB_DEPENDENT_REC_2; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YX90.
DR   SWISS-2DPAGE; D4YX90.
KW   Cell outer membrane {ECO:0000256|SAAS:SAAS00056510};
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Membrane {ECO:0000256|RuleBase:RU003357,
KW   ECO:0000256|SAAS:SAAS00056489};
KW   Receptor {ECO:0000313|EMBL:BAI94972.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   TonB box {ECO:0000256|RuleBase:RU003357,
KW   ECO:0000256|SAAS:SAAS00056473};
KW   Transmembrane {ECO:0000256|SAAS:SAAS00063231};
KW   Transmembrane beta strand {ECO:0000256|SAAS:SAAS00063215}.
FT   DOMAIN       30    135       Plug. {ECO:0000259|Pfam:PF07715}.
FT   DOMAIN      248    790       TonB_dep_Rec. {ECO:0000259|Pfam:PF00593}.
SQ   SEQUENCE   792 AA;  85654 MW;  C67E25ACBAB44BFF CRC64;
     MSQEAPAQDG QNEGGLQEII VTAQTRAQKL QEVPISVVAV QGTDLATKAV IRPIDLQIAA
     PGFTATETAF ATQFFIRGIG SGLNAGFEQS VGLYVDGVHL PRSLQTRIPF LDVDRVEVLR
     GPQSILLGKN AIAGALNVTT AKPTQDFFGR LTSSYEFNAN ELGLEGAVSG PITDTIRVRV
     AGKYRSSDGY IRNLTLNRLE PARDEAAIRV TADIDVTQDL QLSFKSEYNQ FNTDGKAMEI
     YGEEPAKAGP FAGLTYAQVL VNVFHLDPTL LDNRIDGRRT SDGEKSRAHA TANVLTLNWQ
     TGGYTLRSTT AYTTALADDD AINPDLLGAR IITGHIRDNY TQFSQELRLI SPKFDSFDFI
     AGAYYANGLQ RYRQAVGFPS DSTFVTIVNA RQPGAGTLVA NTWINRRVRV EADTFSAFGQ
     LNWRPISDVT VQLGGRLSYS KIQGSKILTV EPIGGGALPA AQVNAPLVYA QVLAASSSNL
     AGLGAAGNAM INRLGEFPVA GTRRETRFTP DVKILYRPTP QVMLYAGYAR GQKSGGFDFA
     ANNRLTYPTA RDAFEFDDEK AQNFEVGSKM SLLGGRAELN LAAYYTKLTN LQISIFDGRL
     GFNVGNAASA RAQGIEANGR MQLGRHFTLS TGVNYTDFKY LRFPNGQCYF GQTPTVDGNG
     DGVPEFCDYK GKSSQLTSKV TANASLTSVF PIFDGYQIGT TTEVFYASAY DAAANYDPAG
     RQAKYALLNM RVGVGPENGS WELAFVGRNL TDKQVFQFVG DTAIAATVAQ AKSNYAILSQ
     GRTLAIQLNA KF
//

If you have problems or comments...

PBIL Back to PBIL home page