(data stored in ACNUC7421 zone)

SWISSPROT: D4YXB9_SPHJU

ID   D4YXB9_SPHJU            Unreviewed;       590 AA.
AC   D4YXB9;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 48.
DE   SubName: Full=ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:BAI95001.1};
GN   Name=recQ {ECO:0000313|EMBL:BAI95001.1};
GN   OrderedLocusNames=SJA_C1-01670 {ECO:0000313|EMBL:BAI95001.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95001.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95001.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
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DR   EMBL; AP010803; BAI95001.1; -; Genomic_DNA.
DR   RefSeq; WP_013038814.1; NC_014006.1.
DR   ProteinModelPortal; D4YXB9; -.
DR   STRING; 452662.SJA_C1-01670; -.
DR   EnsemblBacteria; BAI95001; BAI95001; SJA_C1-01670.
DR   GeneID; 29271874; -.
DR   KEGG; sjp:SJA_C1-01670; -.
DR   eggNOG; ENOG4105C9U; Bacteria.
DR   eggNOG; COG0514; LUCA.
DR   HOGENOM; HOG000044388; -.
DR   KO; K03654; -.
DR   OMA; QDMFLME; -.
DR   OrthoDB; POG091H011W; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005622; C:intracellular; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR   GO; GO:0009432; P:SOS response; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR004589; DNA_helicase_ATP-dep_RecQ.
DR   InterPro; IPR006293; DNA_helicase_ATP-dep_RecQ_bac.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR010997; HRDC-like.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR032284; RecQ_Zn-bd.
DR   InterPro; IPR018982; RQC_domain.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   Pfam; PF16124; RecQ_Zn_bind; 1.
DR   Pfam; PF09382; RQC; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SMART; SM00956; RQC; 1.
DR   SUPFAM; SSF47819; SSF47819; 1.
DR   SUPFAM; SSF52540; SSF52540; 2.
DR   TIGRFAMs; TIGR01389; recQ; 1.
DR   TIGRFAMs; TIGR00614; recQ_fam; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
DR   PRODOM; D4YXB9.
DR   SWISS-2DPAGE; D4YXB9.
KW   ATP-binding {ECO:0000313|EMBL:BAI95001.1};
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Helicase {ECO:0000313|EMBL:BAI95001.1};
KW   Hydrolase {ECO:0000313|EMBL:BAI95001.1};
KW   Nucleotide-binding {ECO:0000313|EMBL:BAI95001.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753}.
FT   DOMAIN       26    192       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      216    360       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   DOMAIN      516    590       HRDC. {ECO:0000259|PROSITE:PS50967}.
SQ   SEQUENCE   590 AA;  64436 MW;  0EF2CBAA68D43B38 CRC64;
     MRPDIPTLLH DIFGFPAFRG VQEQVVGRIM AGQPTLAIMP TGAGKSLCYQ LPAVALDGCC
     VVVSPLIALM HDQLRAAQAV GIRAASLTSV DADWRETQDR LRNGDLDLLY VAPERASGEA
     FRTLLRAAKI ALFAIDEAHC VSEWGHDFRP DYRLLRPLLD EFPDVPRLAL TATADHHTRD
     DILVQLGIPR EGLIIAGFDR PNIRYAVHPR DGLARQLSDL IAGQTGPGIV YAPTRAATEK
     LAETLGKTGR PTRAYHAGLD PRTRAANQAA FIASEDMVMV ATIAFGMGID KPDVRFVAHA
     ALPKSIEGYY QESGRAGRDG EPAEAHLFWG ADDFARARQR IGELDPLRQQ GERARITALG
     GLVETGTCRR AILLRHFGEN PSPTCGNCDN CLNPPPSIDA TQTARKFLSA VYRTGQSFGV
     GHIEQVLTGA VTDKIRERGH DKISVYGIVD GEETALLRPV SRALLVRDAL QTNEHGGLEF
     GPNARPILRG EEEVSLVLPP RKERRRKSAR NGSAENPVGD PLFDALRVCR RELAQEAGVP
     PYVIFHDSTL REMAEQRPTS LTELGHISGV GQRKLDAYGD AFLAAIRPYL
//

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