(data stored in ACNUC7421 zone)

SWISSPROT: D4YXK5_SPHJU

ID   D4YXK5_SPHJU            Unreviewed;       429 AA.
AC   D4YXK5;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 43.
DE   SubName: Full=tRNA/rRNA cytosine-C5-methylase {ECO:0000313|EMBL:BAI95087.1};
DE            EC=2.1.1.- {ECO:0000313|EMBL:BAI95087.1};
GN   Name=sun {ECO:0000313|EMBL:BAI95087.1};
GN   OrderedLocusNames=SJA_C1-02530 {ECO:0000313|EMBL:BAI95087.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95087.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95087.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding
CC       methyltransferase superfamily. RsmB/NOP family.
CC       {ECO:0000256|PROSITE-ProRule:PRU01023,
CC       ECO:0000256|SAAS:SAAS00811926}.
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DR   EMBL; AP010803; BAI95087.1; -; Genomic_DNA.
DR   RefSeq; WP_013038890.1; NC_014006.1.
DR   ProteinModelPortal; D4YXK5; -.
DR   STRING; 452662.SJA_C1-02530; -.
DR   EnsemblBacteria; BAI95087; BAI95087; SJA_C1-02530.
DR   GeneID; 29271956; -.
DR   KEGG; sjp:SJA_C1-02530; -.
DR   eggNOG; ENOG4105CYJ; Bacteria.
DR   eggNOG; COG0144; LUCA.
DR   HOGENOM; HOG000037302; -.
DR   KO; K03500; -.
DR   OMA; LRVNRQH; -.
DR   OrthoDB; POG091H02E2; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   Gene3D; 1.10.940.10; -; 1.
DR   InterPro; IPR001678; MeTrfase_RsmB/NOP2.
DR   InterPro; IPR006027; NusB_RsmB_TIM44.
DR   InterPro; IPR023267; RCMT.
DR   InterPro; IPR029063; SAM-dependent_MTases.
DR   Pfam; PF01189; Methyltr_RsmB-F; 1.
DR   Pfam; PF01029; NusB; 1.
DR   PRINTS; PR02008; RCMTFAMILY.
DR   SUPFAM; SSF48013; SSF48013; 1.
DR   SUPFAM; SSF53335; SSF53335; 1.
DR   PROSITE; PS51686; SAM_MT_RSMB_NOP; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YXK5.
DR   SWISS-2DPAGE; D4YXK5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Methyltransferase {ECO:0000256|PROSITE-ProRule:PRU01023,
KW   ECO:0000256|SAAS:SAAS00811925, ECO:0000313|EMBL:BAI95087.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU01023,
KW   ECO:0000256|SAAS:SAAS00811931};
KW   S-adenosyl-L-methionine {ECO:0000256|PROSITE-ProRule:PRU01023,
KW   ECO:0000256|SAAS:SAAS00811929};
KW   Transferase {ECO:0000256|PROSITE-ProRule:PRU01023,
KW   ECO:0000256|SAAS:SAAS00811930, ECO:0000313|EMBL:BAI95087.1}.
FT   DOMAIN      149    426       SAM_MT_RSMB_NOP. {ECO:0000259|PROSITE:
FT                                PS51686}.
FT   ACT_SITE    359    359       Nucleophile. {ECO:0000256|PROSITE-
FT                                ProRule:PRU01023}.
FT   BINDING     264    264       S-adenosyl-L-methionine.
FT                                {ECO:0000256|PROSITE-ProRule:PRU01023}.
FT   BINDING     290    290       S-adenosyl-L-methionine.
FT                                {ECO:0000256|PROSITE-ProRule:PRU01023}.
FT   BINDING     306    306       S-adenosyl-L-methionine.
FT                                {ECO:0000256|PROSITE-ProRule:PRU01023}.
SQ   SEQUENCE   429 AA;  45328 MW;  A4A63C68D37ADE30 CRC64;
     MPRPSRPQDV PGLPARRAAL RLLDAVLRRG DPLELALHGA AQGLAPADRA LVHAIAAETL
     RHLPDLDALI DGATRQPLPH DAKARMVLRI ALIQVLALGT APHAAIATAL PLVDGGPRKL
     VHGVFGTLTR ADPTLPSPPA LPPETAGRWA AQWGDAMPQA AAHAYAQRPP VDVSLRDPAR
     TAHWAEALNG RSLAPGHVRL PEGAVIPDLP GFGEGAWWVQ DLAASTPARL LGAGEGRCVL
     DLCAAPGGKT MQLAAAGWRV TAVDQSKKRL ERLSENLART GLSAAIVQDD LRAWRPEAPA
     DAVLLDAPCT ATGIYRRHPD VLHRIGPRQI AEMAELQAEL LARAAAWLKP GGTLVYATCS
     LEQAEGEDQV ARFLDARPDF GPLPAMPAEL PDGIAPAAQG WVRTLPDILA AQGGTDGFFV
     ARLIRSTKP
//

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