(data stored in SCRATCH zone)

SWISSPROT: D4YXT6_SPHJU

ID   D4YXT6_SPHJU            Unreviewed;       398 AA.
AC   D4YXT6;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   08-MAY-2019, entry version 44.
DE   SubName: Full=Putative integrase {ECO:0000313|EMBL:BAI95168.1};
GN   OrderedLocusNames=SJA_C1-03340 {ECO:0000313|EMBL:BAI95168.1};
OS   Sphingobium japonicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26
OS   / NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95168.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95168.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S
RC   {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC       {ECO:0000256|SAAS:SAAS00995761}.
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DR   EMBL; AP010803; BAI95168.1; -; Genomic_DNA.
DR   RefSeq; WP_013038952.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-03340; -.
DR   EnsemblBacteria; BAI95168; BAI95168; SJA_C1-03340.
DR   GeneID; 29272037; -.
DR   KEGG; sjp:SJA_C1-03340; -.
DR   eggNOG; ENOG4105DFP; Bacteria.
DR   eggNOG; COG0582; LUCA.
DR   HOGENOM; HOG000263105; -.
DR   OMA; GWRFRFR; -.
DR   BioCyc; SJAP452662:GHEL-345-MONOMER; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   Gene3D; 1.10.150.130; -; 1.
DR   Gene3D; 1.10.443.10; -; 1.
DR   Gene3D; 3.30.160.390; -; 1.
DR   InterPro; IPR011010; DNA_brk_join_enz.
DR   InterPro; IPR013762; Integrase-like_cat_sf.
DR   InterPro; IPR002104; Integrase_catalytic.
DR   InterPro; IPR038488; Integrase_DNA-bd_sf.
DR   InterPro; IPR025166; Integrase_DNA_bind_dom.
DR   InterPro; IPR010998; Integrase_recombinase_N.
DR   Pfam; PF13356; Arm-DNA-bind_3; 1.
DR   Pfam; PF00589; Phage_integrase; 1.
DR   SUPFAM; SSF56349; SSF56349; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YXT6.
DR   SWISS-2DPAGE; D4YXT6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753}.
FT   DOMAIN        8     87       Arm-DNA-bind_3. {ECO:0000259|Pfam:
FT                                PF13356}.
FT   DOMAIN      210    371       Phage_integrase. {ECO:0000259|Pfam:
FT                                PF00589}.
SQ   SEQUENCE   398 AA;  44555 MW;  5FACEF30E40E6855 CRC64;
     MALSSLALSK AKPREKPYKL ADGHGLYLLI TPGGGRYWRM NYRFGGKAKT MAMGVFPLIT
     LAEAREKRDA ARKLLAAGSD PTATRKEAEA REAFEATTGF RTVAEEWLAK REREGLGAVT
     LGKVKWLLEF AYPSLGNRKI SEITSMELLA VLRQVEGRGR HETARRLRSV CGRVFRYAIA
     TGRAEHDLSA NLRDALTTPK VKHLAAITNS QQVGPLMRAI ETFDGHAVTR AALRLAPHVF
     VRPGELRHAE WAEIDFDKAL WCIPAEKMKM RRPHRVPLSR QSLAIFASIR EITGTGKFVF
     PGFQSLKRPM SENALNGALR RLGYSGDEMT SHGFRAMAST LLNEMGRWHP DAIERQLAHA
     EADAVRRAYA RGEYWDERVA MMQAWSDYLD DLAGKPPT
//

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