(data stored in ACNUC7421 zone)

SWISSPROT: D4YYK5_SPHJU

ID   D4YYK5_SPHJU            Unreviewed;       159 AA.
AC   D4YYK5;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 45.
DE   RecName: Full=50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00766472};
GN   Name=rplM {ECO:0000256|HAMAP-Rule:MF_01366,
GN   ECO:0000313|EMBL:BAI95437.1};
GN   OrderedLocusNames=SJA_C1-06030 {ECO:0000313|EMBL:BAI95437.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95437.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95437.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- FUNCTION: This protein is one of the early assembly proteins of
CC       the 50S ribosomal subunit, although it is not seen to bind rRNA by
CC       itself. It is important during the early stages of 50S assembly.
CC       {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00766477}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01366, ECO:0000256|SAAS:SAAS00766470}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL13
CC       family. {ECO:0000256|HAMAP-Rule:MF_01366,
CC       ECO:0000256|SAAS:SAAS00812032}.
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DR   EMBL; AP010803; BAI95437.1; -; Genomic_DNA.
DR   RefSeq; WP_007686594.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-06030; -.
DR   EnsemblBacteria; BAI95437; BAI95437; SJA_C1-06030.
DR   GeneID; 29272279; -.
DR   KEGG; sjp:SJA_C1-06030; -.
DR   eggNOG; ENOG4108UM5; Bacteria.
DR   eggNOG; COG0102; LUCA.
DR   HOGENOM; HOG000225286; -.
DR   KO; K02871; -.
DR   OMA; VLMGKHK; -.
DR   OrthoDB; POG091H013T; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-HAMAP.
DR   CDD; cd00392; Ribosomal_L13; 1.
DR   Gene3D; 3.90.1180.10; -; 1.
DR   HAMAP; MF_01366; Ribosomal_L13; 1.
DR   InterPro; IPR005822; Ribosomal_L13.
DR   InterPro; IPR005823; Ribosomal_L13_bac-type.
DR   PANTHER; PTHR11545; PTHR11545; 1.
DR   Pfam; PF00572; Ribosomal_L13; 1.
DR   PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR   SUPFAM; SSF52161; SSF52161; 1.
DR   TIGRFAMs; TIGR01066; rplM_bact; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YYK5.
DR   SWISS-2DPAGE; D4YYK5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01366,
KW   ECO:0000256|SAAS:SAAS00766476};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01366,
KW   ECO:0000256|SAAS:SAAS00766469, ECO:0000313|EMBL:BAI95437.1}.
SQ   SEQUENCE   159 AA;  17665 MW;  65DF1AECE1F906EF CRC64;
     MKALMKTTKP ATPATVEKKW VLIDAEGLVV GRLASTVANI LRGKHKPSFT PHVDCGDNVI
     IINAEKVKFT GRKLTDKVYY KHTGYAGGIK ETTPQKVLEG RFPERVLEKA VERMIPRGPL
     GRQQMRNLRI FAGAEHPHAA QNPEVLDFAS RNRKNKVGA
//

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