(data stored in SCRATCH zone)
SWISSPROT: D4YYM5_SPHJU
ID D4YYM5_SPHJU Unreviewed; 156 AA.
AC D4YYM5;
DT 15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT 15-JUN-2010, sequence version 1.
DT 16-JAN-2019, entry version 47.
DE RecName: Full=30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480};
GN Name=rpsG {ECO:0000256|HAMAP-Rule:MF_00480,
GN ECO:0000313|EMBL:BAI95457.1};
GN OrderedLocusNames=SJA_C1-06230 {ECO:0000313|EMBL:BAI95457.1};
OS Sphingobium japonicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26
OS / NBRC 101211 / UT26S).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95457.1, ECO:0000313|Proteomes:UP000007753};
RN [1] {ECO:0000313|EMBL:BAI95457.1, ECO:0000313|Proteomes:UP000007753}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S
RC {ECO:0000313|Proteomes:UP000007753};
RX PubMed=20817768; DOI=10.1128/JB.00961-10;
RA Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA Fukui S., Fujita N., Tsuda M.;
RT "Complete genome sequence of the representative gamma-
RT hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT UT26.";
RL J. Bacteriol. 192:5852-5853(2010).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC directly to 16S rRNA where it nucleates assembly of the head
CC domain of the 30S subunit. Is located at the subunit interface
CC close to the decoding center, probably blocks exit of the E-site
CC tRNA. {ECO:0000256|HAMAP-Rule:MF_00480}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts proteins S9
CC and S11. {ECO:0000256|HAMAP-Rule:MF_00480}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS7 family.
CC {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003619}.
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DR EMBL; AP010803; BAI95457.1; -; Genomic_DNA.
DR RefSeq; WP_007686590.1; NC_014006.1.
DR STRING; 452662.SJA_C1-06230; -.
DR EnsemblBacteria; BAI95457; BAI95457; SJA_C1-06230.
DR GeneID; 29272296; -.
DR KEGG; sjp:SJA_C1-06230; -.
DR eggNOG; ENOG4108UHY; Bacteria.
DR eggNOG; COG0049; LUCA.
DR HOGENOM; HOG000039067; -.
DR KO; K02992; -.
DR OMA; TERLMNE; -.
DR Proteomes; UP000007753; Chromosome 1.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.455.10; -; 1.
DR HAMAP; MF_00480_B; Ribosomal_S7_B; 1.
DR InterPro; IPR000235; Ribosomal_S5/S7.
DR InterPro; IPR005717; Ribosomal_S7_bac/org-type.
DR InterPro; IPR020606; Ribosomal_S7_CS.
DR InterPro; IPR023798; Ribosomal_S7_dom.
DR InterPro; IPR036823; Ribosomal_S7_dom_sf.
DR PANTHER; PTHR11205; PTHR11205; 1.
DR Pfam; PF00177; Ribosomal_S7; 1.
DR PIRSF; PIRSF002122; RPS7p_RPS7a_RPS5e_RPS7o; 1.
DR SUPFAM; SSF47973; SSF47973; 1.
DR TIGRFAMs; TIGR01029; rpsG_bact; 1.
DR PROSITE; PS00052; RIBOSOMAL_S7; 1.
PE 3: Inferred from homology;
DR PRODOM; D4YYM5.
DR SWISS-2DPAGE; D4YYM5.
KW Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_00480,
KW ECO:0000256|RuleBase:RU003619};
KW Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_00480,
KW ECO:0000256|RuleBase:RU003619, ECO:0000313|EMBL:BAI95457.1};
KW RNA-binding {ECO:0000256|HAMAP-Rule:MF_00480,
KW ECO:0000256|RuleBase:RU003620};
KW rRNA-binding {ECO:0000256|HAMAP-Rule:MF_00480,
KW ECO:0000256|RuleBase:RU003620};
KW tRNA-binding {ECO:0000256|HAMAP-Rule:MF_00480}.
FT DOMAIN 1 149 Ribosomal_S7. {ECO:0000259|Pfam:PF00177}.
SQ SEQUENCE 156 AA; 17617 MW; 48C1C84A032E6521 CRC64;
MSRRRRPEKR VILPDPKFGD VVLSKFMNSI MQDGKKAVAE SIVYGALDTV EAKSKKDPIA
MFHDALNNVK PGIEVRSRRV GGATYQVPVE VRPERAQALA IRWLITASRN RSETTMAARL
SGELLDAANN RGNAVKKRED THRMAEANRA FSHYRW
//
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