(data stored in ACNUC7421 zone)

SWISSPROT: D4YYN2_SPHJU

ID   D4YYN2_SPHJU            Unreviewed;       278 AA.
AC   D4YYN2;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   16-JAN-2019, entry version 47.
DE   RecName: Full=50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320};
GN   Name=rplB {ECO:0000256|HAMAP-Rule:MF_01320,
GN   ECO:0000313|EMBL:BAI95464.1};
GN   OrderedLocusNames=SJA_C1-06300 {ECO:0000313|EMBL:BAI95464.1};
OS   Sphingobium japonicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26
OS   / NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95464.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95464.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S
RC   {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- FUNCTION: One of the primary rRNA binding proteins. Required for
CC       association of the 30S and 50S subunits to form the 70S ribosome,
CC       for tRNA binding and peptide bond formation. It has been suggested
CC       to have peptidyltransferase activity; this is somewhat
CC       controversial. Makes several contacts with the 16S rRNA in the 70S
CC       ribosome. {ECO:0000256|HAMAP-Rule:MF_01320}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms a bridge to the
CC       30S subunit in the 70S ribosome. {ECO:0000256|HAMAP-
CC       Rule:MF_01320}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL2 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01320}.
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DR   EMBL; AP010803; BAI95464.1; -; Genomic_DNA.
DR   RefSeq; WP_013039174.1; NC_014006.1.
DR   STRING; 452662.SJA_C1-06300; -.
DR   EnsemblBacteria; BAI95464; BAI95464; SJA_C1-06300.
DR   GeneID; 29272303; -.
DR   KEGG; sjp:SJA_C1-06300; -.
DR   eggNOG; ENOG4105CFD; Bacteria.
DR   eggNOG; COG0090; LUCA.
DR   HOGENOM; HOG000232982; -.
DR   KO; K02886; -.
DR   OMA; HGYIKGV; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0016740; F:transferase activity; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 2.30.30.30; -; 1.
DR   Gene3D; 4.10.950.10; -; 1.
DR   HAMAP; MF_01320_B; Ribosomal_L2_B; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR022666; Rbsml_prot_L2_RNA-bd_dom.
DR   InterPro; IPR014722; Rib_L2_dom2.
DR   InterPro; IPR002171; Ribosomal_L2.
DR   InterPro; IPR005880; Ribosomal_L2_bac/org-type.
DR   InterPro; IPR022669; Ribosomal_L2_C.
DR   InterPro; IPR022671; Ribosomal_L2_CS.
DR   InterPro; IPR014726; Ribosomal_L2_dom3.
DR   InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR   PANTHER; PTHR13691; PTHR13691; 1.
DR   Pfam; PF00181; Ribosomal_L2; 1.
DR   Pfam; PF03947; Ribosomal_L2_C; 1.
DR   PIRSF; PIRSF002158; Ribosomal_L2; 1.
DR   SMART; SM01383; Ribosomal_L2; 1.
DR   SMART; SM01382; Ribosomal_L2_C; 1.
DR   SUPFAM; SSF50104; SSF50104; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR01171; rplB_bact; 1.
DR   PROSITE; PS00467; RIBOSOMAL_L2; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YYN2.
DR   SWISS-2DPAGE; D4YYN2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01320};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01320,
KW   ECO:0000313|EMBL:BAI95464.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01320};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01320}.
FT   DOMAIN      124    252       Ribosomal_L2_C. {ECO:0000259|SMART:
FT                                SM01382}.
SQ   SEQUENCE   278 AA;  30416 MW;  E4B36CB949406CB4 CRC64;
     MALKSYNPTS PAQRGLILVD RSALHKGKPV KALTEGKRKT GGRNNKGHVT SRGIAGGHKQ
     RYRIIDFKRR LWDVEGTVER LEYDPNRTAF IALVNYPDGT QAYILAPQRL APGDKVIAGK
     KTDVKPGNAM ELGQMPVGTI IHNIEMKPGK GGQLCRSAGT YAQLVGRDRG MVMVRLSSGE
     QRYIRSDCMG TVGAVSNPDN ANTNLAKAGR NRWLGKRPLT RGVAKNPVDH PHGGGEGRTS
     GGRHPVTPWG KPTKGARTRH NKATDKFIIR SRHAKKKR
//

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