(data stored in ACNUC7421 zone)

SWISSPROT: D4YYN6_SPHJU

ID   D4YYN6_SPHJU            Unreviewed;       143 AA.
AC   D4YYN6;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   07-JUN-2017, entry version 39.
DE   RecName: Full=50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414};
GN   Name=rplP {ECO:0000256|HAMAP-Rule:MF_01342,
GN   ECO:0000313|EMBL:BAI95468.1};
GN   OrderedLocusNames=SJA_C1-06340 {ECO:0000313|EMBL:BAI95468.1};
OS   Sphingobium japonicum (strain NBRC 101211 / UT26S).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=452662 {ECO:0000313|EMBL:BAI95468.1, ECO:0000313|Proteomes:UP000007753};
RN   [1] {ECO:0000313|EMBL:BAI95468.1, ECO:0000313|Proteomes:UP000007753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101211 / UT26S {ECO:0000313|Proteomes:UP000007753};
RX   PubMed=20817768; DOI=10.1128/JB.00961-10;
RA   Nagata Y., Ohtsubo Y., Endo R., Ichikawa N., Ankai A., Oguchi A.,
RA   Fukui S., Fujita N., Tsuda M.;
RT   "Complete genome sequence of the representative gamma-
RT   hexachlorocyclohexane-degrading bacterium Sphingobium japonicum
RT   UT26.";
RL   J. Bacteriol. 192:5852-5853(2010).
CC   -!- FUNCTION: Binds 23S rRNA and is also seen to make contacts with
CC       the A and possibly P site tRNAs. {ECO:0000256|HAMAP-Rule:MF_01342,
CC       ECO:0000256|RuleBase:RU004414}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01342, ECO:0000256|RuleBase:RU004414}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL16
CC       family. {ECO:0000256|HAMAP-Rule:MF_01342,
CC       ECO:0000256|RuleBase:RU004413}.
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DR   EMBL; AP010803; BAI95468.1; -; Genomic_DNA.
DR   RefSeq; WP_007686573.1; NC_014006.1.
DR   ProteinModelPortal; D4YYN6; -.
DR   STRING; 452662.SJA_C1-06340; -.
DR   EnsemblBacteria; BAI95468; BAI95468; SJA_C1-06340.
DR   GeneID; 29272307; -.
DR   KEGG; sjp:SJA_C1-06340; -.
DR   eggNOG; ENOG4108R70; Bacteria.
DR   eggNOG; COG0197; LUCA.
DR   HOGENOM; HOG000164573; -.
DR   KO; K02878; -.
DR   OMA; KGAVEYW; -.
DR   OrthoDB; POG091H01B8; -.
DR   Proteomes; UP000007753; Chromosome 1.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-HAMAP.
DR   CDD; cd01433; Ribosomal_L16_L10e; 1.
DR   Gene3D; 3.90.1170.10; -; 1.
DR   HAMAP; MF_01342; Ribosomal_L16; 1.
DR   InterPro; IPR016180; Ribosomal_L10e/L16.
DR   InterPro; IPR000114; Ribosomal_L16.
DR   InterPro; IPR020798; Ribosomal_L16_CS.
DR   PANTHER; PTHR12220; PTHR12220; 1.
DR   Pfam; PF00252; Ribosomal_L16; 1.
DR   PRINTS; PR00060; RIBOSOMALL16.
DR   SUPFAM; SSF54686; SSF54686; 1.
DR   TIGRFAMs; TIGR01164; rplP_bact; 1.
DR   PROSITE; PS00586; RIBOSOMAL_L16_1; 1.
PE   3: Inferred from homology;
DR   PRODOM; D4YYN6.
DR   SWISS-2DPAGE; D4YYN6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000007753};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007753};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004413};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004413, ECO:0000313|EMBL:BAI95468.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004414};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004414};
KW   tRNA-binding {ECO:0000256|HAMAP-Rule:MF_01342,
KW   ECO:0000256|RuleBase:RU004414}.
FT   DOMAIN        4    132       Ribosomal_L16. {ECO:0000259|Pfam:
FT                                PF00252}.
SQ   SEQUENCE   143 AA;  15872 MW;  29BDB02F87FC7683 CRC64;
     MLQPKKMKFR KTFKGRIKGD AKGGSALNFG AYGLKALEPE RVTARQIEAA RRAIQRHLRR
     QGRLWIRVFP DVPVSKKPAE VRQGKGKGSV EYWAARVKPG RILFELDGVP GPLAAEAFSR
     AAMKLPIKTK VVARLGDTSH LEG
//

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