(data stored in ACNUC10243 zone)

EMBL: BC066672

ID   BC066672; SV 1; linear; mRNA; STD; VRT; 2440 BP.
XX
AC   BC066672;
XX
DT   04-MAR-2004 (Rel. 79, Created)
DT   16-JUL-2006 (Rel. 88, Last updated, Version 13)
XX
DE   Danio rerio zgc:77366, mRNA (cDNA clone MGC:77366 IMAGE:6968796), complete
DE   cds.
XX
KW   MGC.
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [1]
RP   1-2440
RX   DOI; 10.1073/pnas.242603899.
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-2440
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (01-MAR-2004) to the INSDC.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
XX
DR   MD5; 58925503d6641254f31a49fd39a4fece.
XX
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Dr. Chi-Bin Chien
CC   cDNA Library Preparation: Invitrogen Corp
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: National Institutes of Health Intramural
CC   Sequencing Center (NISC),
CC   Gaithersburg, Maryland;
CC   Web site: http://www.nisc.nih.gov/
CC   Contact: nisc_mgc@nhgri.nih.gov
CC   Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC   Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC   Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC   Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC   Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC   McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC   Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC   Young,A., Zhang,L.-H. and Green,E.D.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 146 Row: l Column: 17
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 44890515.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2440
FT                   /organism="Danio rerio"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NCI_CGAP_ZEmb3"
FT                   /clone="MGC:77366 IMAGE:6968796"
FT                   /tissue_type="Embryo, zebrafish whole embryo 72 hpf"
FT                   /note="Vector: pCMV-SPORT6.1"
FT                   /db_xref="taxon:7955"
FT   gene            1..2440
FT                   /gene="zgc:77366"
FT                   /note="synonyms: fc01g05, wu:fc01g05"
FT   CDS_pept        36..953
FT                   /codon_start=1
FT                   /gene="zgc:77366"
FT                   /product="zgc:77366"
FT                   /db_xref="GOA:Q6NYB0"
FT                   /db_xref="InterPro:IPR000504"
FT                   /db_xref="InterPro:IPR012677"
FT                   /db_xref="InterPro:IPR034801"
FT                   /db_xref="InterPro:IPR035979"
FT                   /db_xref="UniProtKB/TrEMBL:Q6NYB0"
FT                   /db_xref="ZFIN:ZDB-GENE-030131-2249"
FT                   /protein_id="AAH66672.1"
FT                   /translation="MTAQMENQLCKLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQ
FT                   QLKRSRCFGFVTYSSPDEADSAMSARPHILDGNNVELKRAVAREDAGKPEALAKVKKIF
FT                   IGGLKDDIEEDHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKF
FT                   HMINGHKVEVKKALTKQEMQAAGSRGGGRGGRGGGRGMGRPQNGYGGRGGGYGNYGGGG
FT                   YGGNDGYGGGYGGGYGGGYGGGYGDQMEGYGGGNGYNDFGSGYGQQSSGYGPMKGNYSG
FT                   RSNAPYSRGGGGGGYGRGGYGGSY"
XX
SQ   Sequence 2440 BP; 753 A; 452 C; 548 G; 687 T; 0 other;
     ttttacatca acccagcaga gattagatta cgaagatgac ggctcaaatg gaaaaccagc        60
     tttgcaagct atttgtcggc ggtcttaacg tccagactac cgacgatggg ctgcgaaacc       120
     atttcgagca gtacggcaag ctcacggact gcgtggtggt gcagaaccaa caattgaagc       180
     gctcgcgttg cttcggtttt gtgacctact cgagtccgga cgaggcggac tccgccatgt       240
     cggcccgacc tcacattcta gatggcaata acgtggagct gaaaagggct gtggcccgag       300
     aagacgcggg caagcccgag gctctcgcaa aggtaaaaaa gatcttcatc ggcggtctaa       360
     aagacgatat cgaagaggat cacctccgtg actgtttctc gcagttcggc gcggtggaga       420
     aggcggaggt gatcacggac aaagagaccg gcaagaagcg aggcttcggc tttgtctatt       480
     tcgaagataa cgactcggcc gacaaagccg tggtgctcaa gttccacatg attaacggtc       540
     ataaagtgga ggtaaagaaa gccctcacca agcaggagat gcaagctgcc ggtagccgcg       600
     gcggtggtcg tggcggccga ggaggcggaa gggggatggg cagaccgcag aacggctacg       660
     gcgggcgcgg cggaggatac ggcaactacg gtggcggcgg ctatgggggc aacgacggct       720
     acggtggtgg ctatggaggc ggatacggtg gcgggtatgg gggaggctac ggggaccaaa       780
     tggaaggcta cggcggtggt aacggctaca atgactttgg cagcggctat ggccagcagt       840
     cctctggcta tggcccaatg aaaggtaatt actcgggcag aagcaacgct ccttactccc       900
     gaggtggtgg tggtggtggt tacggcaggg ggggttacgg aggctcgtat taagagcgtt       960
     tattaggtct cgtgttaaga gcagctcctt ccccagccca catcacagtt ttgaccacag      1020
     attatcttca gctaagtagc cagattgagt caccttaatg tggcgaggca ttgactgaaa      1080
     cactcaagct ctattcagga gttcagaact ttatccagcc tagcagatca taggtagggt      1140
     tcacctatcc gactttattc aacatcttac agctgttact actactacta ctacacatca      1200
     ttttgctctt ttccctgatg tacttaggga gatatttttt tccagcaaga catataggac      1260
     tactactccg gatatcttct tattataaga ctggccagtg gtggtcggag caggctacct      1320
     gttcgcaaac tgcttttcac acgtttttct ttgtgcattg ggattaagtt aagattagtg      1380
     tttttgcttg ttagtgtagg catgtgtttc tccatttagc atatgtattg tatctttatt      1440
     gtgtatgtta ttttttctaa gacatttata tcttgttttt atttagtcaa tcacagtgaa      1500
     cccctgtaga catttaggac ttcattgatt ggtagcagac cctatctgca tatcttgaga      1560
     tctgtaaagc aacattggcc aaaaaaaaaa taaaaaaata aataaaaata aatatatata      1620
     tatatatata tatatatata tatatatata tatatatata tatatatata tatataacca      1680
     agttattgaa tttattatat atatgaatat atattcatat atattcatat aataataata      1740
     ataaatttaa taacttggta aaccgtatca ataaattctt taaaaacttc attaccagtg      1800
     attctatgaa acatctccac caaatataat ctaatcaaca ctaatgacaa tttaaagaat      1860
     gctacatttc ttctaaatgt attgtatttt tcatcttgta actaatttaa tacattctta      1920
     aaatagctct aatgcagagt tctttgaaac cgtgatgaat gggaaaacaa attttctaaa      1980
     gaatggccac taaattggtt gctctatagt gcttgcaaga cttgtcatgg actttgttgc      2040
     caatcaatga tgattgatct ttaattaggc tcaatggaca tttagatgtt gtttgtctaa      2100
     acataaaaaa cgtgttggaa taaacagatt tatggcgtct caggaacaaa aagttaattg      2160
     ggtgactgtt cgagctcact taaagtttcc cagtatacgt taacatagtg attaacgtgt      2220
     atgccatccc aattagtgtc atttattaaa tagttcaagc acataatgca aatattgtca      2280
     tggtgtttca gtaatccttt ttcgttggga ctctgaagac tgattggagt tgttttttta      2340
     cagtttaatc atttagtaaa agacttaaat gctaaaaaaa aaaaaaaaaa aaaaaaaaaa      2400
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa                            2440
//

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