(data stored in SCRATCH zone)

SWISSPROT: C0H4U7_PLAF7

ID   C0H4U7_PLAF7            Unreviewed;       373 AA.
AC   C0H4U7;
DT   05-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   05-MAY-2009, sequence version 1.
DT   11-DEC-2019, entry version 64.
DE   SubName: Full=Ubiquitin {ECO:0000313|EMBL:CAX64124.1};
GN   ORFNames=PF3D7_0815700 {ECO:0000313|EMBL:CAX64124.1};
OS   Plasmodium falciparum (isolate 3D7).
OC   Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
OC   Plasmodiidae; Plasmodium; Plasmodium (Laverania).
OX   NCBI_TaxID=36329 {ECO:0000313|EMBL:CAX64124.1, ECO:0000313|Proteomes:UP000001450};
RN   [1] {ECO:0000313|Proteomes:UP000001450}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Isolate 3D7 {ECO:0000313|Proteomes:UP000001450};
RX   PubMed=12368864; DOI=10.1038/nature01097;
RA   Gardner M.J., Hall N., Fung E., White O., Berriman M., Hyman R.W.,
RA   Carlton J.M., Pain A., Nelson K.E., Bowman S., Paulsen I.T., James K.D.,
RA   Eisen J.A., Rutherford K.M., Salzberg S.L., Craig A., Kyes S., Chan M.-S.,
RA   Nene V., Shallom S.J., Suh B., Peterson J., Angiuoli S., Pertea M.,
RA   Allen J., Selengut J., Haft D., Mather M.W., Vaidya A.B., Martin D.M.A.,
RA   Fairlamb A.H., Fraunholz M.J., Roos D.S., Ralph S.A., McFadden G.I.,
RA   Cummings L.M., Subramanian G.M., Mungall C., Venter J.C., Carucci D.J.,
RA   Hoffman S.L., Newbold C., Davis R.W., Fraser C.M., Barrell B.G.;
RT   "Genome sequence of the human malaria parasite Plasmodium falciparum.";
RL   Nature 419:498-511(2002).
RN   [2] {ECO:0000313|Proteomes:UP000001450}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Isolate 3D7 {ECO:0000313|Proteomes:UP000001450};
RX   PubMed=12368867; DOI=10.1038/nature01095;
RA   Hall N., Pain A., Berriman M., Churcher C.M., Harris B., Harris D.,
RA   Mungall K.L., Bowman S., Atkin R., Baker S., Barron A., Brooks K.,
RA   Buckee C.O., Burrows C., Cherevach I., Chillingworth C., Chillingworth T.,
RA   Christodoulou Z., Clark L., Clark R., Corton C., Cronin A., Davies R.M.,
RA   Davis P., Dear P., Dearden F., Doggett J., Feltwell T., Goble A.,
RA   Goodhead I., Gwilliam R., Hamlin N., Hance Z., Harper D., Hauser H.,
RA   Hornsby T., Holroyd S., Horrocks P., Humphray S., Jagels K., James K.D.,
RA   Johnson D., Kerhornou A., Knights A., Konfortov B., Kyes S., Larke N.,
RA   Lawson D., Lennard N., Line A., Maddison M., Mclean J., Mooney P.,
RA   Moule S., Murphy L., Oliver K., Ormond D., Price C., Quail M.A.,
RA   Rabbinowitsch E., Rajandream M.A., Rutter S., Rutherford K.M., Sanders M.,
RA   Simmonds M., Seeger K., Sharp S., Smith R., Squares R., Squares S.,
RA   Stevens K., Taylor K., Tivey A., Unwin L., Whitehead S., Woodward J.R.,
RA   Sulston J.E., Craig A., Newbold C., Barrell B.G.;
RT   "Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13.";
RL   Nature 419:527-531(2002).
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DR   EMBL; AL844507; CAX64124.1; -; Genomic_DNA.
DR   RefSeq; XP_002808847.1; XM_002808801.1.
DR   TCDB; 3.A.25.2.1; the symbiont-specific erad-like machinery (selma) family.
DR   PRIDE; C0H4U7; -.
DR   EnsemblProtists; CAX64124; CAX64124; PF3D7_0815700.
DR   GeneDB; PF3D7_0815700.1:pep; -.
DR   GeneID; 2655266; -.
DR   KEGG; pfa:PF3D7_0815700; -.
DR   EuPathDB; PlasmoDB:PF3D7_0815700; -.
DR   HOGENOM; HOG000282681; -.
DR   InParanoid; C0H4U7; -.
DR   OMA; YKFSHFL; -.
DR   Proteomes; UP000001450; Chromosome 8.
DR   GO; GO:0020011; C:apicoplast; IDA:GeneDB.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATPase activity; IDA:GeneDB.
DR   GO; GO:0010564; P:regulation of cell cycle process; IDA:GeneDB.
DR   GO; GO:0030433; P:ubiquitin-dependent ERAD pathway; IDA:GeneDB.
DR   InterPro; IPR000626; Ubiquitin-like_dom.
DR   InterPro; IPR029071; Ubiquitin-like_domsf.
DR   Pfam; PF00240; ubiquitin; 1.
DR   SUPFAM; SSF54236; SSF54236; 1.
DR   PROSITE; PS50053; UBIQUITIN_2; 1.
PE   4: Predicted;
DR   PRODOM; C0H4U7.
DR   SWISS-2DPAGE; C0H4U7.
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001450};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        290..310
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        322..339
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        345..366
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          69..129
FT                   /note="Ubiquitin-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50053"
SQ   SEQUENCE   373 AA;  44914 MW;  2EDF9FE6AB3A4488 CRC64;
     MIKKVHICLF IIFFYVIFLI HICKGIRLQN YKNERINNRH MLNTIRNNVS IYQNKHISNN
     NTKENKCNIM INYYDKSNIF CKSFLLSMEE KDNIKNIKKK IEEIYGIPLT LQEILYDNKK
     LENNITIQNI IKDKQIKILN LRLITILPHL FLQKDDDNNT NKRNDVSSSS SSSSLYNNEY
     IKSNKRITYL KNKLTYYGYL TLLNEYKKLS HILENKKYIL KNDDILESFK SFDQEFEKTL
     KNNNINLHKI KKEINKLKHI DKKKLLLRLE VDYPLMSNNL TKRIKQLFQY YYMGDITTII
     KFSIFFYILY KYADYPNHIK KFFLYLSILF LISPFKPFYK FSHFLFFSVP NNILFSGFTN
     ILSASYQQIL MCQ
//

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