(data stored in SCRATCH zone)

SWISSPROT: C0ZLN8_RHOE4

ID   C0ZLN8_RHOE4            Unreviewed;       339 AA.
AC   C0ZLN8;
DT   26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   26-MAY-2009, sequence version 1.
DT   16-JAN-2019, entry version 59.
DE   SubName: Full=Putative AsnC family transcriptional regulator {ECO:0000313|EMBL:BAH30865.1};
GN   OrderedLocusNames=RER_01570 {ECO:0000313|EMBL:BAH30865.1};
OS   Rhodococcus erythropolis (strain PR4 / NBRC 100887).
OC   Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
OC   Rhodococcus.
OX   NCBI_TaxID=234621 {ECO:0000313|EMBL:BAH30865.1, ECO:0000313|Proteomes:UP000002204};
RN   [1] {ECO:0000313|Proteomes:UP000002204}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PR4 / NBRC 100887 {ECO:0000313|Proteomes:UP000002204};
RA   Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S.,
RA   Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.;
RT   "Comparison of the complete genome sequences of Rhodococcus
RT   erythropolis PR4 and Rhodococcus opacus B4.";
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:BAH30865.1, ECO:0000313|Proteomes:UP000002204}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PR4 / NBRC 100887 {ECO:0000313|Proteomes:UP000002204};
RX   PubMed=16423019; DOI=10.1111/j.1462-2920.2005.00899.x;
RA   Sekine M., Tanikawa S., Omata S., Saito M., Fujisawa T., Tsukatani N.,
RA   Tajima T., Sekigawa T., Kosugi H., Matsuo Y., Nishiko R., Imamura K.,
RA   Ito M., Narita H., Tago S., Fujita N., Harayama S.;
RT   "Sequence analysis of three plasmids harboured in Rhodococcus
RT   erythropolis strain PR4.";
RL   Environ. Microbiol. 8:334-346(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AP008957; BAH30865.1; -; Genomic_DNA.
DR   RefSeq; WP_020905727.1; NC_012490.1.
DR   STRING; 234621.RER_01570; -.
DR   EnsemblBacteria; BAH30865; BAH30865; RER_01570.
DR   KEGG; rer:RER_01570; -.
DR   PATRIC; fig|234621.6.peg.587; -.
DR   HOGENOM; HOG000251939; -.
DR   OMA; AYVEVRC; -.
DR   BioCyc; RERY234621:GHDE-160-MONOMER; -.
DR   Proteomes; UP000002204; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 2.
DR   InterPro; IPR000485; AsnC-type_HTH_dom.
DR   InterPro; IPR011008; Dimeric_a/b-barrel.
DR   InterPro; IPR019888; Tscrpt_reg_AsnC-typ.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF13404; HTH_AsnC-type; 2.
DR   SMART; SM00344; HTH_ASNC; 2.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF54909; SSF54909; 1.
PE   4: Predicted;
DR   PRODOM; C0ZLN8.
DR   SWISS-2DPAGE; C0ZLN8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002204}.
FT   DOMAIN       13     50       HTH asnC-type. {ECO:0000259|Pfam:
FT                                PF13404}.
FT   DOMAIN      179    215       HTH asnC-type. {ECO:0000259|Pfam:
FT                                PF13404}.
SQ   SEQUENCE   339 AA;  36780 MW;  A18E7E9CC0B78AA5 CRC64;
     MKPESDAYVI AESDLEIINA LQLNPRASWT QLSSVLDMDS TTIARRWRRL VSNGHSWVNA
     VAIGRTHIFG YLLIRTTQDA VADVGERLSE LACAYLLART EGEYEYFVGV VAADQKSLDA
     LVCEHLAADP GILSIRSRVG VKVYRDGFSW EPGALGQAGR AQLATAAAPA DPTVFRESDG
     ALLEALGRDG RASYARLAAI CGTNETAIRR RLAQLTASRQ LIFRCDVSQQ AVGSPFEVIF
     DVAVDGSTDE LGNLVSSWPE IRLLVATTGT ANMLISVWLS SLAQSLVVED RLRRIGSVRI
     LDRRVSLYPM KRFGQLLGPS GVAEGHVPVA IWGAGDVIR
//

If you have problems or comments...

PBIL Back to PBIL home page