(data stored in SCRATCH zone)

SWISSPROT: C1ASC0_RHOOB

ID   C1ASC0_RHOOB            Unreviewed;       772 AA.
AC   C1ASC0;
DT   26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   26-MAY-2009, sequence version 1.
DT   07-JUN-2017, entry version 58.
DE   SubName: Full=Putative LuxR family transcriptional regulator {ECO:0000313|EMBL:BAH48369.1};
GN   OrderedLocusNames=ROP_01220 {ECO:0000313|EMBL:BAH48369.1};
OS   Rhodococcus opacus (strain B4).
OC   Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
OC   Rhodococcus.
OX   NCBI_TaxID=632772 {ECO:0000313|EMBL:BAH48369.1, ECO:0000313|Proteomes:UP000002212};
RN   [1] {ECO:0000313|EMBL:BAH48369.1, ECO:0000313|Proteomes:UP000002212}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=B4 {ECO:0000313|EMBL:BAH48369.1,
RC   ECO:0000313|Proteomes:UP000002212};
RA   Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S.,
RA   Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.;
RT   "Comparison of the complete genome sequences of Rhodococcus
RT   erythropolis PR4 and Rhodococcus opacus B4.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AP011115; BAH48369.1; -; Genomic_DNA.
DR   RefSeq; WP_012687378.1; NC_012522.1.
DR   ProteinModelPortal; C1ASC0; -.
DR   STRING; 632772.ROP_01220; -.
DR   EnsemblBacteria; BAH48369; BAH48369; ROP_01220.
DR   KEGG; rop:ROP_01220; -.
DR   PATRIC; fig|632772.20.peg.149; -.
DR   eggNOG; COG2771; LUCA.
DR   eggNOG; COG3903; LUCA.
DR   HOGENOM; HOG000053696; -.
DR   OMA; EPRDGEY; -.
DR   OrthoDB; POG091H0F63; -.
DR   BioCyc; ROPA632772:GH0Q-121-MONOMER; -.
DR   Proteomes; UP000002212; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd06170; LuxR_C_like; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR   InterPro; IPR011990; TPR-like_helical_dom.
DR   InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00196; GerE; 1.
DR   PRINTS; PR00038; HTHLUXR.
DR   SMART; SM00421; HTH_LUXR; 1.
DR   SUPFAM; SSF46894; SSF46894; 1.
DR   SUPFAM; SSF48452; SSF48452; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS50043; HTH_LUXR_2; 1.
PE   4: Predicted;
DR   PRODOM; C1ASC0.
DR   SWISS-2DPAGE; C1ASC0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002212};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00411,
KW   ECO:0000256|SAAS:SAAS00489599};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00411,
KW   ECO:0000256|SAAS:SAAS00053185};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00411,
KW   ECO:0000256|SAAS:SAAS00053955}.
FT   DOMAIN      704    769       HTH luxR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50043}.
FT   DNA_BIND    728    747       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00411}.
SQ   SEQUENCE   772 AA;  84289 MW;  2F2A6EEDA9C82CB5 CRC64;
     MPLLTLSRVG NLPSELSSFV GRRSEVSEVK HLLSAFRLVT LTGFGGVGKT RLALRVATDV
     SRAFTDGVWL IELGEQQDDT RFTETVARAL GIEMPSATMP LEALTEYLAP RQLLLVLDNC
     EHVVDGIAAP ATTLLRKCPR LRILATSRET LAIAGEAALP LRPLTFPDPN PSCSAQDLSS
     YEAVRLFTER ARAAVPGFGV TEDNKAVIAR ICQRLDGLPL PIELAAAGLR VLSAQQILLR
     LSDRYRPPSI TNRGTPARQQ SLRRCIDWSH ELCTAREREV WRRVSVFTGG FELDGAEALC
     AGEFSPNELL EVLAALVNKS ILIPEQTHGV IRYRMLETVR DYGRDRLRES GEYSTFQRRH
     RDWFEQLTVR AHAEWLGPRQ AEWTTRLDRE LPNLRDAMTY CLADPIHAPV GLHIANALRR
     FWISRGLLSE GRQWLRRALT SQVEQPTTSQ VTALCTEGML AAMQGDVTDP VALVAKARHY
     AAGVADPGLE QLVTRTEAQL ALSSGDAALA VTHFEKVLDA CRASEDLDTQ LEVLLGLGVA
     CGRCGDRARA MTCFEEILAI TEPLGDTVHR AQALAALGST ISCTDPVQAA HLLTRGLQLS
     RSLNTPGTAT SCLYTCAWIA ATEHRTEHAA VLIGAVEKLA ESTEAHWLNG YTIDTGQESS
     LARVRLVLGE RAFSKAVEHG RGLTLREAVA YALGENTAAD DPSRSGPSKD LTPRERQVAD
     LVAQGLTNRA IADKLVISQR TAQGHVEHVL AKLGFGSRAQ IAAWVAPNAG ER
//

If you have problems or comments...

PBIL Back to PBIL home page