(data stored in SCRATCH zone)

SWISSPROT: C1E1G7_MICCC

ID   C1E1G7_MICCC            Unreviewed;       838 AA.
AC   C1E1G7;
DT   26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   26-MAY-2009, sequence version 1.
DT   05-JUL-2017, entry version 49.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACO61738.1};
GN   ORFNames=MICPUN_79594 {ECO:0000313|EMBL:ACO61738.1};
OS   Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) (Picoplanktonic
OS   green alga).
OC   Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae;
OC   Mamiellales; Mamiellaceae; Micromonas.
OX   NCBI_TaxID=296587 {ECO:0000313|EMBL:ACO61738.1, ECO:0000313|Proteomes:UP000002009};
RN   [1] {ECO:0000313|EMBL:ACO61738.1, ECO:0000313|Proteomes:UP000002009}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RCC299 / NOUM17 {ECO:0000313|Proteomes:UP000002009};
RX   PubMed=19359590; DOI=10.1126/science.1167222;
RA   Worden A.Z., Lee J.H., Mock T., Rouze P., Simmons M.P., Aerts A.L.,
RA   Allen A.E., Cuvelier M.L., Derelle E., Everett M.V., Foulon E.,
RA   Grimwood J., Gundlach H., Henrissat B., Napoli C., McDonald S.M.,
RA   Parker M.S., Rombauts S., Salamov A., Von Dassow P., Badger J.H.,
RA   Coutinho P.M., Demir E., Dubchak I., Gentemann C., Eikrem W.,
RA   Gready J.E., John U., Lanier W., Lindquist E.A., Lucas S., Mayer K.F.,
RA   Moreau H., Not F., Otillar R., Panaud O., Pangilinan J., Paulsen I.,
RA   Piegu B., Poliakov A., Robbens S., Schmutz J., Toulza E., Wyss T.,
RA   Zelensky A., Zhou K., Armbrust E.V., Bhattacharya D., Goodenough U.W.,
RA   Van de Peer Y., Grigoriev I.V.;
RT   "Green evolution and dynamic adaptations revealed by genomes of the
RT   marine picoeukaryotes Micromonas.";
RL   Science 324:268-272(2009).
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DR   EMBL; CP001324; ACO61738.1; -; Genomic_DNA.
DR   RefSeq; XP_002500480.1; XM_002500434.1.
DR   ProteinModelPortal; C1E1G7; -.
DR   GeneID; 8242096; -.
DR   KEGG; mis:MICPUN_79594; -.
DR   HOGENOM; HOG000218327; -.
DR   InParanoid; C1E1G7; -.
DR   KO; K00962; -.
DR   Proteomes; UP000002009; Chromosome 3.
DR   GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.
DR   GO; GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0006402; P:mRNA catabolic process; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   Gene3D; 1.10.10.400; -; 1.
DR   Gene3D; 3.30.1370.10; -; 1.
DR   Gene3D; 3.30.230.70; -; 2.
DR   HAMAP; MF_01595; PNPase; 1.
DR   InterPro; IPR001247; ExoRNase_PH_dom1.
DR   InterPro; IPR015847; ExoRNase_PH_dom2.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR004088; KH_dom_type_1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012162; PNPase.
DR   InterPro; IPR027408; PNPase/RNase_PH_dom.
DR   InterPro; IPR015848; PNPase_PH_RNA-bd_bac/org-type.
DR   InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   PANTHER; PTHR11252; PTHR11252; 1.
DR   Pfam; PF00013; KH_1; 1.
DR   Pfam; PF01138; RNase_PH; 2.
DR   Pfam; PF03725; RNase_PH_C; 1.
DR   Pfam; PF00575; S1; 1.
DR   SMART; SM00322; KH; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   SUPFAM; SSF54211; SSF54211; 2.
DR   SUPFAM; SSF54791; SSF54791; 1.
DR   SUPFAM; SSF55666; SSF55666; 2.
DR   TIGRFAMs; TIGR03591; polynuc_phos; 1.
DR   PROSITE; PS50126; S1; 1.
PE   3: Inferred from homology;
DR   PRODOM; C1E1G7.
DR   SWISS-2DPAGE; C1E1G7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002009};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002009}.
FT   DOMAIN      720    789       S1 motif. {ECO:0000259|PROSITE:PS50126}.
SQ   SEQUENCE   838 AA;  89229 MW;  F60EFD0FB1A83935 CRC64;
     MRARAPRIGA ARSAGVQPCP RVVAPNGRRR PVRCAAAGAP DDPYAALDRT PKTLTLRIGE
     SEVTVETGRI GRQANGAVMV TEGETVIYAT ICAGRDVTAD GGFVPLTVNY QERYSAVGRT
     AGGYRKRDGG VRENETLIGR LVDRPLRPMI PKGWAYDTQI LEWVLSYDGA RSTDALAITA
     ASCAAAISDV PLKKPIAGVR VGLLPGETEP LINPTCEQME RSRLDLVLAG TEDAVMMIEG
     FGDFLTTQEM LYAIEKGHEA VANACRDIDA WAKDVGRVKN EAAVLVAPEG VDDAVRALVG
     AELAEAMAIS VKQTRGAAVE GIRARAIESL AGGDDAKFTV SAVRRPAQSL RFAFCALLLF
     SLFPPGPRAF SRPFVRLPPP ALENDVRLAC GRCESNALRS MIRANGVRQD GRDTKTVRPI
     TCSGGLLPRT HGSSLFTRGE TQAIAAATLG GATDAQKVDG LGNDKDRRFY LHYFFPPSSV
     GETGRVGAAS RREVGHGNLA ERALMPVIPP YDDFPFTVRL ESTITESNGS SSMATVCAGS
     LALQDAGVPI TRKVAGIAMG LILGDESAGE APVILTDILG SEDALGDMDF KVAGDGDGIS
     AFQMDIKVEG ITLAVLREAL ESARVGLVHI LGEMDKADPA PAGRMSAYAP QVEVVEVPTK
     YIGKVIGKGG EQIKAICEQT KIDTIDINEE GVVTLTGSFG CDMPKAVEII RSLTVEPEVG
     KTYRNARVTK VLDFGAFVEI LPGVEGLCHV SELDVTRVAN VRDVVEEGQT IDVKLLETNE
     RGQFKLSRRA VLLDEGGEKV RRELAEAKVA AGGDDADDAP GRGRPPPKAR RGRSRLRE
//

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