(data stored in SCRATCH zone)

SWISSPROT: C3MEK3_SINFN

ID   C3MEK3_SINFN            Unreviewed;       125 AA.
AC   C3MEK3;
DT   16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT   16-JUN-2009, sequence version 1.
DT   07-JUN-2017, entry version 67.
DE   RecName: Full=Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00084647};
DE            Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};
GN   Name=ihfB {ECO:0000256|HAMAP-Rule:MF_00381};
GN   Synonyms=himD {ECO:0000256|HAMAP-Rule:MF_00381};
GN   OrderedLocusNames=NGR_c00220 {ECO:0000313|EMBL:ACP23826.1};
OS   Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=394 {ECO:0000313|EMBL:ACP23826.1, ECO:0000313|Proteomes:UP000001054};
RN   [1] {ECO:0000313|EMBL:ACP23826.1, ECO:0000313|Proteomes:UP000001054}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX   PubMed=19376903; DOI=10.1128/AEM.00515-09;
RA   Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA   Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA   Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA   Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT   "Rhizobium sp. strain NGR234 possesses a remarkable number of
RT   secretion systems.";
RL   Appl. Environ. Microbiol. 75:4035-4045(2009).
CC   -!- FUNCTION: This protein is one of the two subunits of integration
CC       host factor, a specific DNA-binding protein that functions in
CC       genetic recombination as well as in transcriptional and
CC       translational control. {ECO:0000256|HAMAP-Rule:MF_00381,
CC       ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062218}.
CC   -!- SUBUNIT: Heterodimer of an alpha and a beta chain.
CC       {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941,
CC       ECO:0000256|SAAS:SAAS00560763}.
CC   -!- SIMILARITY: Belongs to the bacterial histone-like protein family.
CC       {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003939,
CC       ECO:0000256|SAAS:SAAS00560676}.
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DR   EMBL; CP001389; ACP23826.1; -; Genomic_DNA.
DR   RefSeq; WP_012706611.1; NC_012587.1.
DR   RefSeq; YP_002824579.1; NC_012587.1.
DR   STRING; 394.NGR_c00220; -.
DR   EnsemblBacteria; ACP23826; ACP23826; NGR_c00220.
DR   GeneID; 7790601; -.
DR   KEGG; rhi:NGR_c00220; -.
DR   PATRIC; fig|394.7.peg.2812; -.
DR   eggNOG; ENOG41080YA; Bacteria.
DR   eggNOG; COG0776; LUCA.
DR   HOGENOM; HOG000043828; -.
DR   KO; K05788; -.
DR   OMA; LCRGENI; -.
DR   OrthoDB; POG091H01KX; -.
DR   Proteomes; UP000001054; Chromosome.
DR   GO; GO:0005694; C:chromosome; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
DR   Gene3D; 4.10.520.10; -; 1.
DR   HAMAP; MF_00381; IHF_beta; 1.
DR   InterPro; IPR000119; Hist_DNA-bd.
DR   InterPro; IPR020816; Histone-like_DNA-bd_CS.
DR   InterPro; IPR010992; IHF-like_DNA-bd_dom.
DR   InterPro; IPR005685; IHF_beta.
DR   PANTHER; PTHR33175:SF10; PTHR33175:SF10; 1.
DR   Pfam; PF00216; Bac_DNA_binding; 1.
DR   PRINTS; PR01727; DNABINDINGHU.
DR   SMART; SM00411; BHL; 1.
DR   SUPFAM; SSF47729; SSF47729; 1.
DR   TIGRFAMs; TIGR00988; hip; 1.
DR   PROSITE; PS00045; HISTONE_LIKE; 1.
PE   3: Inferred from homology;
DR   PRODOM; C3MEK3.
DR   SWISS-2DPAGE; C3MEK3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001054};
KW   DNA recombination {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062277};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00560702};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001054};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062104};
KW   Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062238};
KW   Translation regulation {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062382}.
SQ   SEQUENCE   125 AA;  14002 MW;  B5288E88F576D4DC CRC64;
     MFRASGATFQ ASQADRKSKK TKGAKVIKSE LVQIVAARNP HLYHRDVENI VNAVLDEITD
     ALAAGNRVEL RGFGAFSVKN RPSRSGRNPR TGDSVFVEEK WVPFFKTGKE LRERLNPGMN
     DRDDD
//

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