(data stored in SCRATCH zone)

SWISSPROT: C3MF40_SINFN

ID   C3MF40_SINFN            Unreviewed;       400 AA.
AC   C3MF40;
DT   16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT   16-JUN-2009, sequence version 1.
DT   07-JUN-2017, entry version 42.
DE   SubName: Full=Integrase catalytic core domain protein {ECO:0000313|EMBL:ACP23877.1};
GN   OrderedLocusNames=NGR_c00730 {ECO:0000313|EMBL:ACP23877.1};
OS   Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=394 {ECO:0000313|EMBL:ACP23877.1, ECO:0000313|Proteomes:UP000001054};
RN   [1] {ECO:0000313|EMBL:ACP23877.1, ECO:0000313|Proteomes:UP000001054}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX   PubMed=19376903; DOI=10.1128/AEM.00515-09;
RA   Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA   Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA   Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA   Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT   "Rhizobium sp. strain NGR234 possesses a remarkable number of
RT   secretion systems.";
RL   Appl. Environ. Microbiol. 75:4035-4045(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001389; ACP23877.1; -; Genomic_DNA.
DR   RefSeq; WP_012706662.1; NC_012587.1.
DR   RefSeq; YP_002824630.1; NC_012587.1.
DR   STRING; 394.NGR_c00730; -.
DR   EnsemblBacteria; ACP23877; ACP23877; NGR_c00730.
DR   GeneID; 7790652; -.
DR   KEGG; rhi:NGR_c00730; -.
DR   PATRIC; fig|394.7.peg.2866; -.
DR   eggNOG; ENOG4108KQ5; Bacteria.
DR   eggNOG; ENOG410XTHD; LUCA.
DR   HOGENOM; HOG000267831; -.
DR   OMA; IDRYNWH; -.
DR   OrthoDB; POG091H02QF; -.
DR   Proteomes; UP000001054; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_dom.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF13683; rve_3; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; C3MF40.
DR   SWISS-2DPAGE; C3MF40.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001054};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001054}.
FT   DOMAIN      138    304       Integrase catalytic.
FT                                {ECO:0000259|PROSITE:PS50994}.
SQ   SEQUENCE   400 AA;  44650 MW;  61B6524118563550 CRC64;
     MVWRETGIME ERLKFVAACL SGEETMAGLC ALYGISRKTG YKWLRRFQLR GPAGLEDLPR
     APLNHGRATA AELVERIVAE KEAHPLWGPK KIVARLARQD PATAWPSAST AGAILNRHGL
     VGRRRARWKG AGNGPWPEPA MPNAVWTGDH KGWFTTRDGW RCEPLTVMDV KSRYLLALEA
     TGSTGDEEAW PVFERLFDEH GLPDRIRTDN GPPFAAAGVT GLTPLSLRFV RLGITLERIA
     PGKPQQNGKH ERFHLTMLPL AKAPAADRAA QAEAFEAFRR EYNEERPHET LGMDTPAEHY
     RASTRKMPVS PPEPDYPAEA AVRKVRHNGA VKWQGAEIYV SATLVGEVVA IEETESGEWA
     MRFYAHRLGF IDEKRGRLVR KTVLQPRPAV GLADELREEL
//

If you have problems or comments...

PBIL Back to PBIL home page