(data stored in SCRATCH zone)

SWISSPROT: C3MFU6_SINFN

ID   C3MFU6_SINFN            Unreviewed;       302 AA.
AC   C3MFU6;
DT   16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT   16-JUN-2009, sequence version 1.
DT   07-JUN-2017, entry version 62.
DE   SubName: Full=Putative HTH-type transcriptional regulator, TetR family {ECO:0000313|EMBL:ACP23997.1};
GN   OrderedLocusNames=NGR_c01970 {ECO:0000313|EMBL:ACP23997.1};
OS   Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=394 {ECO:0000313|EMBL:ACP23997.1, ECO:0000313|Proteomes:UP000001054};
RN   [1] {ECO:0000313|EMBL:ACP23997.1, ECO:0000313|Proteomes:UP000001054}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX   PubMed=19376903; DOI=10.1128/AEM.00515-09;
RA   Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA   Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA   Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA   Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT   "Rhizobium sp. strain NGR234 possesses a remarkable number of
RT   secretion systems.";
RL   Appl. Environ. Microbiol. 75:4035-4045(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001389; ACP23997.1; -; Genomic_DNA.
DR   RefSeq; WP_012706782.1; NC_012587.1.
DR   RefSeq; YP_002824750.1; NC_012587.1.
DR   ProteinModelPortal; C3MFU6; -.
DR   STRING; 394.NGR_c01970; -.
DR   EnsemblBacteria; ACP23997; ACP23997; NGR_c01970.
DR   GeneID; 7790775; -.
DR   KEGG; rhi:NGR_c01970; -.
DR   PATRIC; fig|394.7.peg.2994; -.
DR   eggNOG; ENOG4108RDG; Bacteria.
DR   eggNOG; ENOG4111FWI; LUCA.
DR   HOGENOM; HOG000248228; -.
DR   OMA; ISHHYAG; -.
DR   OrthoDB; POG091H02BD; -.
DR   Proteomes; UP000001054; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
DR   InterPro; IPR023772; DNA-bd_HTH_TetR-type_CS.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR001647; HTH_TetR.
DR   InterPro; IPR011075; Tet_transcr_reg_TetR-rel_C.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF48498; SSF48498; 1.
DR   PROSITE; PS01081; HTH_TETR_1; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
DR   PRODOM; C3MFU6.
DR   SWISS-2DPAGE; C3MFU6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001054};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335,
KW   ECO:0000256|SAAS:SAAS00786913};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001054};
KW   Transcription {ECO:0000256|SAAS:SAAS00131596};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00132066}.
FT   DOMAIN      110    170       HTH tetR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50977}.
FT   DNA_BIND    133    152       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00335}.
SQ   SEQUENCE   302 AA;  33279 MW;  49787BAD36DF1AB6 CRC64;
     MPGPRPSSTR GSLGSQSFCR HENSSPGRSF VQHLRLVTLF HGGHRCTCAA IIQVYNNCAA
     DFLRTSPKCR PYSGARHEPD RFTDNHDLPE RLLFPVAAMN RRSFHRAPEG ERRQELIEAT
     LDCISEFGLK GATVRQIAVR AGVTAGLVRH YFDSKDQMVA EAYRAVIASL TEKAKNVEGD
     PTTRLKDFIA INLTEPVADS RSVSLWAAFI SQVRVDPVLA EIHRDGYLAF RNALQDLLSD
     FLAAKGRPAG PEECRRYAIA INGLVDGLWV EGCLAGDLFR DGELVSIAMA SVEALLGLPM
     EE
//

If you have problems or comments...

PBIL Back to PBIL home page