(data stored in SCRATCH zone)

SWISSPROT: C3MHK8_SINFN

ID   C3MHK8_SINFN            Unreviewed;       971 AA.
AC   C3MHK8;
DT   16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT   16-JUN-2009, sequence version 1.
DT   07-JUN-2017, entry version 57.
DE   SubName: Full=Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain {ECO:0000313|EMBL:ACP24336.1};
GN   OrderedLocusNames=NGR_c05400 {ECO:0000313|EMBL:ACP24336.1};
OS   Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=394 {ECO:0000313|EMBL:ACP24336.1, ECO:0000313|Proteomes:UP000001054};
RN   [1] {ECO:0000313|EMBL:ACP24336.1, ECO:0000313|Proteomes:UP000001054}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX   PubMed=19376903; DOI=10.1128/AEM.00515-09;
RA   Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA   Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA   Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA   Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT   "Rhizobium sp. strain NGR234 possesses a remarkable number of
RT   secretion systems.";
RL   Appl. Environ. Microbiol. 75:4035-4045(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001389; ACP24336.1; -; Genomic_DNA.
DR   RefSeq; WP_012707121.1; NC_012587.1.
DR   RefSeq; YP_002825089.1; NC_012587.1.
DR   ProteinModelPortal; C3MHK8; -.
DR   STRING; 394.NGR_c05400; -.
DR   EnsemblBacteria; ACP24336; ACP24336; NGR_c05400.
DR   GeneID; 7791766; -.
DR   KEGG; rhi:NGR_c05400; -.
DR   PATRIC; fig|394.7.peg.3354; -.
DR   eggNOG; ENOG4105BZU; Bacteria.
DR   eggNOG; ENOG410XNMH; LUCA.
DR   HOGENOM; HOG000226589; -.
DR   OMA; NLPQIYL; -.
DR   OrthoDB; POG091H049G; -.
DR   Proteomes; UP000001054; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005622; C:intracellular; IEA:GOC.
DR   GO; GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
DR   CDD; cd01948; EAL; 1.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 3.20.20.450; -; 1.
DR   InterPro; IPR001633; EAL_dom.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR001610; PAC.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR013655; PAS_fold_3.
DR   Pfam; PF00563; EAL; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF08447; PAS_3; 1.
DR   SMART; SM00052; EAL; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SMART; SM00086; PAC; 1.
DR   SUPFAM; SSF141868; SSF141868; 1.
DR   SUPFAM; SSF55073; SSF55073; 1.
DR   SUPFAM; SSF55785; SSF55785; 1.
DR   TIGRFAMs; TIGR00254; GGDEF; 1.
DR   TIGRFAMs; TIGR00229; sensory_box; 1.
DR   PROSITE; PS50883; EAL; 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50113; PAC; 1.
PE   4: Predicted;
DR   PRODOM; C3MHK8.
DR   SWISS-2DPAGE; C3MHK8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001054};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001054};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    196    218       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    230    249       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    261    281       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    288    307       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    319    337       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    344    364       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    376    398       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      485    537       PAC (PAS-associated C-terminal).
FT                                {ECO:0000259|PROSITE:PS50113}.
FT   DOMAIN      570    703       GGDEF. {ECO:0000259|PROSITE:PS50887}.
FT   DOMAIN      712    965       EAL. {ECO:0000259|PROSITE:PS50883}.
SQ   SEQUENCE   971 AA;  107266 MW;  BC0F77A67608112F CRC64;
     MMPLTRKPFA SSTARLAAFL VAFAVFIFGV AGGVAHALEP VKISREDTAL DLTATTEIYS
     GRGEAFQVST APGTDGIVRR IEVRSSTEHH QGDWAVFALA NVSEEQLERV IVAPHFRLVN
     SKLFWPDLGS QRILSITPSE GFALDRQPSD EADVFRITLN PGAVITFVAE LATPELPQIY
     LWQPDAYKDT VNAFTLYRGI VLGIAGLLAV FLTILFVVKG TSMLPATAAL AWAVLAYICV
     DFGFLSKLIS VTAGDERIWR AGTEVFLAAG LVIFLFTYLN LNRWHQHLGY ATLAWILGLA
     LLFGVAVYDP AIASGIARLS FALTATVGIV LIAYLGFNRY DRAILLVPAW LLILVWLFGA
     WLAVTGQLAN DIVQPALGGG LVLIVLLIGF TVMQHAFAGG AYQQGLFSDL ERQALALTGS
     GDTVWDWDVA RDRVVTIPDI SHQLGLSLGT MNGPVRNWVP RLHPDDRDRF RATLDVLLEH
     RRGRLNHEFR ARAEDGHYHW LSIRARPVLG ANGEIIRCVG TIVDITEQRN SVERLLQNAL
     LDNLTGLPNR QVFLDRLQAI LLMSDGTNAV RPTVLAIDID RYKQVNDLLG IAAGDNILIA
     LTRRLRRLLR PQDTLARLGG DQFGLILMSE RDPAKIADFA DAVSKAIMVP LNYGNREINL
     TASIGLVSWL DQEQSAASLL DDAELAMFRA KKEGGNRVEP FRPAFRTSGS DRLQLEADLK
     RAIERKELSL VYQPIVRLSD AEVAGFEALM RWDHPKRGNV SPTEFIPIAE NSDIINQLGM
     FAFDQATSDL SEWQIQTGDL PIFVSINLSS AQLLNSGLYD DVRAILNKNR CDPAKVKMEL
     TESLVMENPE QARLVLEKLR EAGLRLALDD FGTGHSSLSY LTRFPFDTIK IDKALVRDPS
     DKRGVVLRSV IAMARELDMR VVAEGIESEE DAIQLAQMGC DYGQSFLFGP PVGSESILRL
     LKERFPLMKR A
//

If you have problems or comments...

PBIL Back to PBIL home page