(data stored in SCRATCH zone)

SWISSPROT: C5DC83_LACTC

ID   C5DC83_LACTC            Unreviewed;       714 AA.
AC   C5DC83;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   05-JUL-2017, entry version 48.
DE   SubName: Full=KLTH0B00924p {ECO:0000313|EMBL:CAR21394.1};
GN   OrderedLocusNames=KLTH0B00924g {ECO:0000313|EMBL:CAR21394.1};
OS   Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284)
OS   (Yeast) (Kluyveromyces thermotolerans).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
OC   Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea.
OX   NCBI_TaxID=559295 {ECO:0000313|EMBL:CAR21394.1, ECO:0000313|Proteomes:UP000002036};
RN   [1] {ECO:0000313|EMBL:CAR21394.1, ECO:0000313|Proteomes:UP000002036}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 56472 / CBS 6340 / NRRL Y-8284
RC   {ECO:0000313|Proteomes:UP000002036};
RX   PubMed=19525356; DOI=10.1101/gr.091546.109;
RG   The Genolevures Consortium;
RA   Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V.,
RA   Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P.,
RA   Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F.,
RA   Anthouard V., Vacherie B., Val M.-E., Fulton R.S., Minx P., Wilson R.,
RA   Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T.,
RA   Seret M.-L., Casaregola S., Despons L., Fairhead C., Fischer G.,
RA   Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C.,
RA   Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E.,
RA   Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C.,
RA   Potier S., Pribylova L., Ozanne C., Richard G.-F., Sacerdot C.,
RA   Straub M.-L., Talla E.;
RT   "Comparative genomics of protoploid Saccharomycetaceae.";
RL   Genome Res. 19:1696-1709(2009).
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DR   EMBL; CU928166; CAR21394.1; -; Genomic_DNA.
DR   RefSeq; XP_002551832.1; XM_002551786.1.
DR   ProteinModelPortal; C5DC83; -.
DR   STRING; 381046.XP_002551832.1; -.
DR   EnsemblFungi; CAR21394; CAR21394; KLTH0B00924g.
DR   GeneID; 8290658; -.
DR   KEGG; lth:KLTH0B00924g; -.
DR   HOGENOM; HOG000174247; -.
DR   InParanoid; C5DC83; -.
DR   KO; K14018; -.
DR   OrthoDB; EOG092C1BUL; -.
DR   Proteomes; UP000002036; Chromosome B.
DR   GO; GO:0005737; C:cytoplasm; IEA:EnsemblFungi.
DR   GO; GO:0005634; C:nucleus; IEA:EnsemblFungi.
DR   GO; GO:0043130; F:ubiquitin binding; IEA:EnsemblFungi.
DR   GO; GO:0006303; P:double-strand break repair via nonhomologous end joining; IEA:EnsemblFungi.
DR   GO; GO:0072671; P:mitochondria-associated ubiquitin-dependent protein catabolic process; IEA:EnsemblFungi.
DR   GO; GO:0034517; P:ribophagy; IEA:EnsemblFungi.
DR   GO; GO:0010992; P:ubiquitin homeostasis; IEA:EnsemblFungi.
DR   Gene3D; 2.120.10.30; -; 1.
DR   Gene3D; 2.130.10.10; -; 1.
DR   InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR   InterPro; IPR033510; PLAA/Doa1/Lub1.
DR   InterPro; IPR015155; PLAA_fam_Ub-bd_PFU.
DR   InterPro; IPR013535; PUL_dom.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom.
DR   InterPro; IPR001680; WD40_repeat.
DR   InterPro; IPR017986; WD40_repeat_dom.
DR   PANTHER; PTHR19849; PTHR19849; 1.
DR   Pfam; PF09070; PFU; 1.
DR   Pfam; PF08324; PUL; 1.
DR   Pfam; PF00400; WD40; 5.
DR   SMART; SM00320; WD40; 7.
DR   SUPFAM; SSF50978; SSF50978; 1.
DR   PROSITE; PS51394; PFU; 1.
DR   PROSITE; PS51396; PUL; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 5.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE   4: Predicted;
DR   PRODOM; C5DC83.
DR   SWISS-2DPAGE; C5DC83.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002036};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002036};
KW   Repeat {ECO:0000256|SAAS:SAAS00780417};
KW   WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221,
KW   ECO:0000256|SAAS:SAAS00775705}.
FT   DOMAIN       12    261       WD_REPEATS_REGION. {ECO:0000259|PROSITE:
FT                                PS50294}.
FT   REPEAT       12     43       WD. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00221}.
FT   REPEAT      101    130       WD. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00221}.
FT   REPEAT      139    171       WD. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00221}.
FT   REPEAT      180    221       WD. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00221}.
FT   REPEAT      221    251       WD. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00221}.
FT   DOMAIN      355    450       PFU. {ECO:0000259|PROSITE:PS51394}.
FT   DOMAIN      467    714       PUL. {ECO:0000259|PROSITE:PS51396}.
SQ   SEQUENCE   714 AA;  78738 MW;  6015EBEE53C65E85 CRC64;
     MVKKVFKLSA TLFGHEQDVK SVAVMSNDEV ATCSRDGSVR LWKKGSNDMW QDTILYKVDE
     FINSLCYDKL SRLLYCGGKD TLINSISPLL GELGQEPEFV LVGHKSNVCA LNSSQGYILS
     GSWDATAKVW FQGALKHELV GHKASVWDVK MLPEVGFYLT ASADGTVKLW EGEKVLKTFS
     NLHTDVVRHL DISPDGDQFA SCSNDGTIKI NDMDGNTLRT LKGHESFVYC VKYTPCGGLV
     SCGEDRSVRV WGPDGAVKQV IRVPAVSVWD LDVLPNGDIL VGCSDSLARI FTCHEGRVAP
     QQELDTFAKE VERTAISSQT MGFDESKLSP SEALLNPGKE GQVIVVKSPN GVNEAHQYTQ
     GAWTKVGDVV SSAGNDKKKE FEGKMYDYVF DVDVTEGAPP LKLPFNANGN AYQAADDFLA
     RYELPASYRE EVVRFLITNT TGVSLEQDQS STSNGQSNSI PQSKPMSVLP VREYLDIRSF
     SPDAIFNGVV KLNAQERSFD DEDLAAIGAA LHDVEDNYEL LFAQASIIRS SWSNKIPAYD
     IMRLIVEYLP HADAMSEFIE EGLGSAMPQL EMLTVRTLAN CFKNKKWGTE LMSKNAVYDS
     VFQTIEPNRP QASKTVNLAV SIATLIFNYS VMIIKSGNLD LLPTVADALN NKFGPSQMIQ
     DSEEAAYRML VAYGNLATVE PTLLQFAKSI AWIKPVKEKY GHLSRFSHVF ADLL
//

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