(data stored in SCRATCH zone)

SWISSPROT: C6AYE6_RHILS

ID   C6AYE6_RHILS            Unreviewed;        99 AA.
AC   C6AYE6;
DT   01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   01-SEP-2009, sequence version 1.
DT   05-JUL-2017, entry version 65.
DE   RecName: Full=Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00084647};
DE            Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};
GN   Name=ihfB {ECO:0000256|HAMAP-Rule:MF_00381};
GN   Synonyms=himD {ECO:0000256|HAMAP-Rule:MF_00381};
GN   OrderedLocusNames=Rleg_0059 {ECO:0000313|EMBL:ACS54370.1};
OS   Rhizobium leguminosarum bv. trifolii (strain WSM1325).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
OX   NCBI_TaxID=395491 {ECO:0000313|EMBL:ACS54370.1, ECO:0000313|Proteomes:UP000002256};
RN   [1] {ECO:0000313|EMBL:ACS54370.1, ECO:0000313|Proteomes:UP000002256}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=WSM1325 {ECO:0000313|EMBL:ACS54370.1,
RC   ECO:0000313|Proteomes:UP000002256};
RX   PubMed=21304718;
RA   Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K.,
RA   Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M.,
RA   Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N.,
RA   Melino V., Denton M., Yates R., Howieson J.;
RT   "Complete genome sequence of Rhizobium leguminosarum bv. trifolii
RT   strain WSM1325, an effective microsymbiont of annual Mediterranean
RT   clovers.";
RL   Stand. Genomic Sci. 2:347-356(2010).
CC   -!- FUNCTION: This protein is one of the two subunits of integration
CC       host factor, a specific DNA-binding protein that functions in
CC       genetic recombination as well as in transcriptional and
CC       translational control. {ECO:0000256|HAMAP-Rule:MF_00381,
CC       ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062218}.
CC   -!- SUBUNIT: Heterodimer of an alpha and a beta chain.
CC       {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941,
CC       ECO:0000256|SAAS:SAAS00560763}.
CC   -!- SIMILARITY: Belongs to the bacterial histone-like protein family.
CC       {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003939,
CC       ECO:0000256|SAAS:SAAS00560676}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001622; ACS54370.1; -; Genomic_DNA.
DR   RefSeq; WP_003544934.1; NC_012850.1.
DR   ProteinModelPortal; C6AYE6; -.
DR   SMR; C6AYE6; -.
DR   EnsemblBacteria; ACS54370; ACS54370; Rleg_0059.
DR   GeneID; 32045323; -.
DR   KEGG; rlg:Rleg_0059; -.
DR   HOGENOM; HOG000043828; -.
DR   KO; K05788; -.
DR   OMA; KIPAHNI; -.
DR   OrthoDB; POG091H01KX; -.
DR   Proteomes; UP000002256; Chromosome.
DR   GO; GO:0005694; C:chromosome; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
DR   Gene3D; 4.10.520.10; -; 1.
DR   HAMAP; MF_00381; IHF_beta; 1.
DR   InterPro; IPR000119; Hist_DNA-bd.
DR   InterPro; IPR020816; Histone-like_DNA-bd_CS.
DR   InterPro; IPR010992; IHF-like_DNA-bd_dom.
DR   InterPro; IPR005685; IHF_beta.
DR   PANTHER; PTHR33175:SF10; PTHR33175:SF10; 1.
DR   Pfam; PF00216; Bac_DNA_binding; 1.
DR   PRINTS; PR01727; DNABINDINGHU.
DR   SMART; SM00411; BHL; 1.
DR   SUPFAM; SSF47729; SSF47729; 1.
DR   TIGRFAMs; TIGR00988; hip; 1.
DR   PROSITE; PS00045; HISTONE_LIKE; 1.
PE   3: Inferred from homology;
DR   PRODOM; C6AYE6.
DR   SWISS-2DPAGE; C6AYE6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002256};
KW   DNA recombination {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062277};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00560702};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062104};
KW   Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062238};
KW   Translation regulation {ECO:0000256|HAMAP-Rule:MF_00381,
KW   ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062382}.
SQ   SEQUENCE   99 AA;  11191 MW;  4801F414CF6613F7 CRC64;
     MIKSELVQIV AARNPHLYHR DVENIVNAVL DEITDALAAG NRVELRGFGA FSVKNRPSRS
     GRNPRTGDTV FVEEKWVPFF KTGKELRERL NPGQADEED
//

If you have problems or comments...

PBIL Back to PBIL home page