(data stored in SCRATCH zone)

SWISSPROT: C6B1M3_RHILS

ID   C6B1M3_RHILS            Unreviewed;       201 AA.
AC   C6B1M3;
DT   01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   01-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 59.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACS54742.1};
GN   OrderedLocusNames=Rleg_0432 {ECO:0000313|EMBL:ACS54742.1};
OS   Rhizobium leguminosarum bv. trifolii (strain WSM1325).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
OX   NCBI_TaxID=395491 {ECO:0000313|EMBL:ACS54742.1, ECO:0000313|Proteomes:UP000002256};
RN   [1] {ECO:0000313|EMBL:ACS54742.1, ECO:0000313|Proteomes:UP000002256}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=WSM1325 {ECO:0000313|EMBL:ACS54742.1,
RC   ECO:0000313|Proteomes:UP000002256};
RX   PubMed=21304718;
RA   Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K.,
RA   Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M.,
RA   Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N.,
RA   Melino V., Denton M., Yates R., Howieson J.;
RT   "Complete genome sequence of Rhizobium leguminosarum bv. trifolii
RT   strain WSM1325, an effective microsymbiont of annual Mediterranean
RT   clovers.";
RL   Stand. Genomic Sci. 2:347-356(2010).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS00565917}.
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DR   EMBL; CP001622; ACS54742.1; -; Genomic_DNA.
DR   RefSeq; WP_012756130.1; NC_012850.1.
DR   ProteinModelPortal; C6B1M3; -.
DR   EnsemblBacteria; ACS54742; ACS54742; Rleg_0432.
DR   KEGG; rlg:Rleg_0432; -.
DR   HOGENOM; HOG000094755; -.
DR   KO; K03088; -.
DR   OMA; FLAYVEG; -.
DR   OrthoDB; POG091H04ZH; -.
DR   BioCyc; RLEG395491:GHX2-437-MONOMER; -.
DR   Proteomes; UP000002256; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C6B1M3.
DR   SWISS-2DPAGE; C6B1M3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002256};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       47    110       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      140    191       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   201 AA;  22183 MW;  4CB0A6F2F433A019 CRC64;
     MSVARTHFPA YSHARMESPV HPAVSRDRGL AEAAIASEAD IRSGLTENLA RLWRYGLVLS
     HQRDVADDLV QATCLRALER ADQFIPGTRL DRWLFSILHS IWLNEIRSRR VRQGQGFVDA
     GETLTFDGAH DTETQVMAHQ VLKQVNALPE AQRTVVFLAY VEGLSYREVA GILDIPIGTV
     MSRLAAARAK LSGAGPEGGR Q
//

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