(data stored in SCRATCH zone)

SWISSPROT: C6WDS0_ACTMD

ID   C6WDS0_ACTMD            Unreviewed;       219 AA.
AC   C6WDS0;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 49.
DE   SubName: Full=Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACU34065.1};
GN   OrderedLocusNames=Amir_0091 {ECO:0000313|EMBL:ACU34065.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34065.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34065.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
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DR   EMBL; CP001630; ACU34065.1; -; Genomic_DNA.
DR   RefSeq; WP_012782728.1; NC_013093.1.
DR   STRING; 446462.Amir_0091; -.
DR   EnsemblBacteria; ACU34065; ACU34065; Amir_0091.
DR   KEGG; ami:Amir_0091; -.
DR   eggNOG; ENOG4108WBQ; Bacteria.
DR   eggNOG; ENOG4111IKG; LUCA.
DR   HOGENOM; HOG000107041; -.
DR   OMA; VNRTVVY; -.
DR   OrthoDB; POG091H0E24; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 3.30.450.40; -; 2.
DR   InterPro; IPR029016; GAF_dom-like.
DR   InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR   InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF09339; HTH_IclR; 1.
DR   SMART; SM00346; HTH_ICLR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF55781; SSF55781; 1.
DR   PROSITE; PS51077; HTH_ICLR; 1.
DR   PROSITE; PS51078; ICLR_ED; 1.
PE   4: Predicted;
DR   PRODOM; C6WDS0.
DR   SWISS-2DPAGE; C6WDS0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00393};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00393};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00393}.
FT   DOMAIN       16     79       HTH iclR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS51077}.
FT   DOMAIN       78    219       IclR-ED (iclR effector binding).
FT                                {ECO:0000259|PROSITE:PS51078}.
FT   DNA_BIND     39     58       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00393}.
SQ   SEQUENCE   219 AA;  22513 MW;  67A346BE14DB0F9F CRC64;
     MSRSPEAGRA DQKESSLTLE RGLALLQAVA DAESDAPTIS ELATAIGASR AAVYRLLVPL
     QARGLVRREG SKVRLGLGVL RLAANVLPQL RIAAQPALRE LAEAVGATAH LTVADGAEAQ
     AVAVVEPSWT AFHVAYRVGS RHPAHRGAAG RAIGLSTEGA QWTVSSGELQ HGAFGVAAPV
     RGVHGLRASV GVVSLDELVG DRVGPQVVAA AQQVADALR
//

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