(data stored in SCRATCH zone)

SWISSPROT: C6WF90_ACTMD

ID   C6WF90_ACTMD            Unreviewed;       224 AA.
AC   C6WF90;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 64.
DE   SubName: Full=Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACU34222.1};
GN   OrderedLocusNames=Amir_0253 {ECO:0000313|EMBL:ACU34222.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34222.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34222.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001630; ACU34222.1; -; Genomic_DNA.
DR   RefSeq; WP_012782885.1; NC_013093.1.
DR   ProteinModelPortal; C6WF90; -.
DR   STRING; 446462.Amir_0253; -.
DR   EnsemblBacteria; ACU34222; ACU34222; Amir_0253.
DR   KEGG; ami:Amir_0253; -.
DR   eggNOG; ENOG4105IJJ; Bacteria.
DR   eggNOG; COG0664; LUCA.
DR   HOGENOM; HOG000250566; -.
DR   OMA; TECEVAE; -.
DR   OrthoDB; POG091H03PG; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR018490; cNMP-bd-like.
DR   InterPro; IPR000595; cNMP-bd_dom.
DR   InterPro; IPR012318; HTH_CRP.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00027; cNMP_binding; 1.
DR   Pfam; PF13545; HTH_Crp_2; 1.
DR   SMART; SM00100; cNMP; 1.
DR   SMART; SM00419; HTH_CRP; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF51206; SSF51206; 1.
DR   PROSITE; PS50042; CNMP_BINDING_3; 1.
DR   PROSITE; PS51063; HTH_CRP_2; 1.
PE   4: Predicted;
DR   PRODOM; C6WF90.
DR   SWISS-2DPAGE; C6WF90.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00387,
KW   ECO:0000256|SAAS:SAAS00738768};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00387,
KW   ECO:0000256|SAAS:SAAS00738373};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00387,
KW   ECO:0000256|SAAS:SAAS00738349}.
FT   DOMAIN       10    130       Cyclic nucleotide-binding.
FT                                {ECO:0000259|PROSITE:PS50042}.
FT   DOMAIN      144    217       HTH crp-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS51063}.
FT   DNA_BIND    177    196       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00387}.
SQ   SEQUENCE   224 AA;  24753 MW;  4DF57D2415598030 CRC64;
     MDETLARAGI FQGVEPAAAE ALAQTLESVE FPRGHVIFAE GEPGDRLYII QSGKVKIGRK
     SPDGRENLLG IFGPSDMFGE LSIFDPGPRT STATTVTEVR AVSMDRPALR QWISNRPEIA
     EQLLRALARR LRRTNSMLAD LIFTDVPGRV AKALLQLAQR FGSQEAGLLR VTHDLTQEEI
     AQFVGASRET VNKALADFAH RGWLRLEGKS VLILDPERLA RRAR
//

If you have problems or comments...

PBIL Back to PBIL home page