(data stored in SCRATCH zone)

SWISSPROT: C6WFA6_ACTMD

ID   C6WFA6_ACTMD            Unreviewed;       304 AA.
AC   C6WFA6;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   30-AUG-2017, entry version 51.
DE   SubName: Full=Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ACU34238.1};
GN   OrderedLocusNames=Amir_0269 {ECO:0000313|EMBL:ACU34238.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34238.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34238.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
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DR   EMBL; CP001630; ACU34238.1; -; Genomic_DNA.
DR   RefSeq; WP_012782901.1; NC_013093.1.
DR   ProteinModelPortal; C6WFA6; -.
DR   STRING; 446462.Amir_0269; -.
DR   EnsemblBacteria; ACU34238; ACU34238; Amir_0269.
DR   KEGG; ami:Amir_0269; -.
DR   eggNOG; ENOG4106KNT; Bacteria.
DR   eggNOG; COG1737; LUCA.
DR   HOGENOM; HOG000027157; -.
DR   OMA; RGPRFRE; -.
DR   OrthoDB; POG091H00ZV; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd05013; SIS_RpiR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR000281; HTH_RpiR.
DR   InterPro; IPR035472; RpiR-like_SIS.
DR   InterPro; IPR001347; SIS.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF01418; HTH_6; 1.
DR   Pfam; PF01380; SIS; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS51071; HTH_RPIR; 1.
DR   PROSITE; PS51464; SIS; 1.
PE   4: Predicted;
DR   PRODOM; C6WFA6.
DR   SWISS-2DPAGE; C6WFA6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00390};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00390};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00390}.
FT   DOMAIN        8     84       HTH rpiR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS51071}.
FT   DOMAIN      132    272       SIS. {ECO:0000259|PROSITE:PS51464}.
FT   DNA_BIND     44     63       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00390}.
SQ   SEQUENCE   304 AA;  32040 MW;  E7E455DD83FFBF6E CRC64;
     MSTENTDASP LVKIRSLLPG LARAEQRVAK VVLDNPATVA HRSITEVAES AGTSETTVTR
     FCKAIGVGGY PELRIALAAD TARTAARTDR DLGGDIGPGD DLRQVVGKVA FADARAVEET
     AEQLNVDTLQ AVVDAVARAG RVDVYGFGAS AFVAFDLQQK LHRIGRTCFA WNDTHIALTS
     AAVLTGADVA VGISHTGSTT ETVEALRVAR ERGATTVALT NFPRSPISEV ADHVLTTAAR
     ETTFRSGAMA SRIAQLTVVD CLFIGVAQHH VESATSALEA TYDAVAGHRL GARPDGRRRR
     EAGR
//

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