(data stored in SCRATCH zone)

SWISSPROT: C6WGQ3_ACTMD

ID   C6WGQ3_ACTMD            Unreviewed;       330 AA.
AC   C6WGQ3;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 54.
DE   SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACU34369.1};
GN   OrderedLocusNames=Amir_0402 {ECO:0000313|EMBL:ACU34369.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34369.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34369.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001630; ACU34369.1; -; Genomic_DNA.
DR   RefSeq; WP_012783032.1; NC_013093.1.
DR   STRING; 446462.Amir_0402; -.
DR   EnsemblBacteria; ACU34369; ACU34369; Amir_0402.
DR   KEGG; ami:Amir_0402; -.
DR   eggNOG; ENOG4108TW3; Bacteria.
DR   eggNOG; COG1175; LUCA.
DR   HOGENOM; HOG000220407; -.
DR   KO; K17330; -.
DR   OMA; WLFNPVI; -.
DR   OrthoDB; POG091H07G2; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0006810; P:transport; IEA:UniProtKB-KW.
DR   CDD; cd06261; TM_PBP2; 1.
DR   InterPro; IPR000515; MetI-like.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; C6WGQ3.
DR   SWISS-2DPAGE; C6WGQ3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     40     65       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    106    126       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    133    160       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    249    270       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    297    319       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN      102    318       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   330 AA;  35844 MW;  F08B53D9052E722C CRC64;
     MTAVDTTGAG ASTGNVPPAP PRSAKGGGGR RRGSAFDRAL PYLLLAPALV AILWLIGFPV
     LSVLLTSFRR LNLRELTRGQ VVWTGLDNYT EVLGDPDFWL VTGRTVAFTA AVVGASVLAG
     LLLAVLMRQV SPLVRIVLQV AMLLAWAMPL LAATTVYQWI FDQEYGILNK TLVQLGFDSY
     AGYSWFSTGL STLGVVGLMI TWQAVPFLAF SLYAGLIGIP RDQYEAAGID GASPWQTFRA
     VTWPELRPLL MMVTFLSVLW DFKVFAQIWA FRQGGPDGAS TTLAVYQYLV GISQSHFGVA
     AAVSVVMMLL LAAVTFQYLR RLVRSQEGEL
//

If you have problems or comments...

PBIL Back to PBIL home page