(data stored in SCRATCH zone)

SWISSPROT: C6WHY5_ACTMD

ID   C6WHY5_ACTMD            Unreviewed;       224 AA.
AC   C6WHY5;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 46.
DE   SubName: Full=Transglycosylase domain protein {ECO:0000313|EMBL:ACU34436.1};
GN   OrderedLocusNames=Amir_0469 {ECO:0000313|EMBL:ACU34436.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34436.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34436.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001630; ACU34436.1; -; Genomic_DNA.
DR   RefSeq; WP_012783099.1; NC_013093.1.
DR   STRING; 446462.Amir_0469; -.
DR   CAZy; GH23; Glycoside Hydrolase Family 23.
DR   EnsemblBacteria; ACU34436; ACU34436; Amir_0469.
DR   KEGG; ami:Amir_0469; -.
DR   eggNOG; ENOG4105MS9; Bacteria.
DR   eggNOG; ENOG4111WB2; LUCA.
DR   HOGENOM; HOG000240139; -.
DR   OMA; DGEYKVV; -.
DR   OrthoDB; POG091H0649; -.
DR   Proteomes; UP000002213; Chromosome.
DR   CDD; cd00118; LysM; 1.
DR   InterPro; IPR018392; LysM_dom.
DR   InterPro; IPR023346; Lysozyme-like_dom.
DR   InterPro; IPR010618; Transglycosylas.
DR   Pfam; PF01476; LysM; 1.
DR   Pfam; PF06737; Transglycosylas; 1.
DR   SMART; SM00257; LysM; 1.
DR   SUPFAM; SSF53955; SSF53955; 1.
PE   4: Predicted;
DR   PRODOM; C6WHY5.
DR   SWISS-2DPAGE; C6WHY5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL        1     44       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        45    224       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5002971485.
FT   DOMAIN      176    224       LysM. {ECO:0000259|SMART:SM00257}.
SQ   SEQUENCE   224 AA;  22957 MW;  54DF55EDD82B52A7 CRC64;
     MAVYRGKHRF QSLRANAAVR GIAKVAVAGV IVGAPLAMAG TASAQGSGVN WDAVAACESG
     GNWSINTGNG YYGGLQFSPS TWSSHGGSGM ANQASRAEQI RVAENVMKTQ GIGAWPVCGP
     KGLGGGAAPA RTAPAPQQAA PAPQKQSTPQ KRATAPVQQQ AAPVVVALPQ SNPNGDYEIK
     AGDTLSKIAS ELKVEGGWAK LHELNKQYIP NADLIMSGMK IATK
//

If you have problems or comments...

PBIL Back to PBIL home page