(data stored in SCRATCH zone)

SWISSPROT: C7QJ39_CATAD

ID   C7QJ39_CATAD            Unreviewed;       770 AA.
AC   C7QJ39;
DT   13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT   13-OCT-2009, sequence version 1.
DT   07-JUN-2017, entry version 48.
DE   SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACU69181.1};
GN   OrderedLocusNames=Caci_0228 {ECO:0000313|EMBL:ACU69181.1};
OS   Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC
OS   102108 / JCM 14897).
OC   Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae;
OC   Catenulispora.
OX   NCBI_TaxID=479433 {ECO:0000313|EMBL:ACU69181.1, ECO:0000313|Proteomes:UP000000851};
RN   [1] {ECO:0000313|EMBL:ACU69181.1, ECO:0000313|Proteomes:UP000000851}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897
RC   {ECO:0000313|Proteomes:UP000000851};
RX   PubMed=21304647;
RA   Copeland A., Lapidus A., Glavina Del Rio T., Nolan M., Lucas S.,
RA   Chen F., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chain P., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Chertkov O., Brettin T., Detter J.C., Han C., Ali Z.,
RA   Tindall B.J., Goker M., Bristow J., Eisen J.A., Markowitz V.,
RA   Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Catenulispora acidiphila type strain (ID
RT   139908).";
RL   Stand. Genomic Sci. 1:119-125(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001700; ACU69181.1; -; Genomic_DNA.
DR   ProteinModelPortal; C7QJ39; -.
DR   STRING; 479433.Caci_0228; -.
DR   EnsemblBacteria; ACU69181; ACU69181; Caci_0228.
DR   KEGG; cai:Caci_0228; -.
DR   eggNOG; ENOG4107FX0; Bacteria.
DR   eggNOG; ENOG410ZR5U; LUCA.
DR   HOGENOM; HOG000158035; -.
DR   OMA; AWISTHE; -.
DR   OrthoDB; POG091H054U; -.
DR   Proteomes; UP000000851; Chromosome.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 1.25.40.10; -; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR011990; TPR-like_helical_dom.
DR   InterPro; IPR019734; TPR_repeat.
DR   Pfam; PF01381; HTH_3; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SMART; SM00028; TPR; 4.
DR   SUPFAM; SSF47413; SSF47413; 1.
DR   SUPFAM; SSF48452; SSF48452; 3.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
DR   PRODOM; C7QJ39.
DR   SWISS-2DPAGE; C7QJ39.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000851};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000851}.
FT   DOMAIN       12     65       HTH cro/C1-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50943}.
SQ   SEQUENCE   770 AA;  83257 MW;  32B3F6AA0EA486DD CRC64;
     MRPEWDRYAQ RLKALRSEQG LSQRRLARAL HVDHSVISRA ESAVRRPDPD LAASIDLLLS
     TGGELQRLAR DAVRKQASAD SLSTRGGPSG AVPRLRSSIP PDSVHFTGRN AEFDQVRSEL
     VERPDAVGAA SVCVISALAG VGKTALAIHS AHRLAGRFPD GCLFLDLRGF TPGHAPLSSF
     EALGALLALL DVPVATIHST EPARSAQFQA ETAGARLLLV LDNAADAHQV RLLLPSAPGC
     RVLVTSRNRL VALDEAVHLD LRPLAEVDAA ALFRMVSAGG RVSQSTVDGI VARCAGVPLA
     LRIAAARCAP GGAFDPELLA AELSRAEDFI GQLDDGERSV RAVFDASFSL LPRELRQVLA
     LLGTRLLTVF DIWDVAMLAD LPLLGAAGAL ERLHAASLLE VRGTDRFVLH DLVAEYAISA
     AGQTLGAEQL RAAIGRLLDA YLRVCDRADS QVTPHRHRFP LAVAAAGAVP DPDFSDYYEA
     LDWQTKHLDT AAALCETAYE HGFDEQCWQL AYALRGVFFL TKHWEQWDRI QRIALAATRR
     LQDPHAECVT LNNLGLILGE RGETDAAHRC LNEAESVCRA ARDRFGENTA RAHRAWLFHT
     AGRHGESLTE HEGVLEFYTQ IDSPRNVAIV MRDMAASEAA LGHTDSALAH LHAAEQAFRK
     LDLTMDLAMA LNDLGETYTA IIDPKRAAEY FEAALAACAE SGSDHERARA HAGLGALAES
     AGRQNWANAH YLQALRLFDA LGAPAADVVR ARLHASTVMF PTTAEEDENR
//

If you have problems or comments...

PBIL Back to PBIL home page