(data stored in SCRATCH zone)

SWISSPROT: C8U1I3_ECO10

ID   C8U1I3_ECO10            Unreviewed;       254 AA.
AC   C8U1I3;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   08-MAY-2019, entry version 66.
DE   SubName: Full=DNA-binding transcriptional dual regulator PdhR {ECO:0000313|EMBL:BAI28991.1};
GN   Name=pdhR {ECO:0000313|EMBL:BAI28991.1};
GN   OrderedLocusNames=ECO103_0113 {ECO:0000313|EMBL:BAI28991.1};
OS   Escherichia coli O103:H2 (strain 12009 / EHEC).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=585395 {ECO:0000313|EMBL:BAI28991.1, ECO:0000313|Proteomes:UP000000959};
RN   [1] {ECO:0000313|EMBL:BAI28991.1, ECO:0000313|Proteomes:UP000000959}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=12009 / EHEC {ECO:0000313|Proteomes:UP000000959};
RX   PubMed=19815525; DOI=10.1073/pnas.0903585106;
RA   Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K.,
RA   Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M.,
RA   Hayashi T.;
RT   "Comparative genomics reveal the mechanism of the parallel evolution
RT   of O157 and non-O157 enterohemorrhagic Escherichia coli.";
RL   Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AP010958; BAI28991.1; -; Genomic_DNA.
DR   RefSeq; WP_000331779.1; NC_013353.1.
DR   EnsemblBacteria; BAI28991; BAI28991; ECO103_0113.
DR   KEGG; eoh:ECO103_0113; -.
DR   HOGENOM; HOG000273991; -.
DR   KO; K05799; -.
DR   OMA; VMQYQIA; -.
DR   BioCyc; ECOL585395:ECO103_RS00580-MONOMER; -.
DR   Proteomes; UP000000959; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.20.120.530; -; 1.
DR   InterPro; IPR011711; GntR_C.
DR   InterPro; IPR008920; TF_FadR/GntR_C.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF07729; FCD; 1.
DR   Pfam; PF00392; GntR; 1.
DR   PRINTS; PR00035; HTHGNTR.
DR   SMART; SM00895; FCD; 1.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF48008; SSF48008; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
DR   PRODOM; C8U1I3.
DR   SWISS-2DPAGE; C8U1I3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000959};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01113652,
KW   ECO:0000313|EMBL:BAI28991.1};
KW   Transcription {ECO:0000256|SAAS:SAAS01113624};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01113681}.
FT   DOMAIN        9     77       HTH gntR-type. {ECO:0000259|PROSITE:
FT                                PS50949}.
SQ   SEQUENCE   254 AA;  29455 MW;  AF202447979E641D CRC64;
     MAYSKIRQPK LSDVIEQQLE FLILEGTLRP GEKLPPEREL AKQFDVSRPS LREAIQRLEA
     KGLLLRRQGG GTFVQSSLWQ SFSDPLVELL SDHPESQYDL LETRHALEGI AAYYAALRST
     DEDKERIREL HHAIELAQQS GDLDTESNAV LQYQIAVTEA AHNVVLLHLL RCMEPMLAQN
     VRQNFELLYS RREMLPLVSS HRTRIFEAIM AGKPEEAREA SHRHLAFIEE ILLDRSREES
     RRERSLRRLE QRKN
//

If you have problems or comments...

PBIL Back to PBIL home page