(data stored in SCRATCH zone)

SWISSPROT: C8U1S0_ECO10

ID   C8U1S0_ECO10            Unreviewed;       304 AA.
AC   C8U1S0;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   08-MAY-2019, entry version 64.
DE   SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI29078.1};
GN   Name=yafC {ECO:0000313|EMBL:BAI29078.1};
GN   OrderedLocusNames=ECO103_0202 {ECO:0000313|EMBL:BAI29078.1};
OS   Escherichia coli O103:H2 (strain 12009 / EHEC).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=585395 {ECO:0000313|EMBL:BAI29078.1, ECO:0000313|Proteomes:UP000000959};
RN   [1] {ECO:0000313|EMBL:BAI29078.1, ECO:0000313|Proteomes:UP000000959}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=12009 / EHEC {ECO:0000313|Proteomes:UP000000959};
RX   PubMed=19815525; DOI=10.1073/pnas.0903585106;
RA   Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K.,
RA   Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M.,
RA   Hayashi T.;
RT   "Comparative genomics reveal the mechanism of the parallel evolution
RT   of O157 and non-O157 enterohemorrhagic Escherichia coli.";
RL   Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; AP010958; BAI29078.1; -; Genomic_DNA.
DR   RefSeq; WP_000648601.1; NC_013353.1.
DR   EnsemblBacteria; BAI29078; BAI29078; ECO103_0202.
DR   KEGG; eoh:ECO103_0202; -.
DR   HOGENOM; HOG000233519; -.
DR   OMA; WPLRGPH; -.
DR   BioCyc; ECOL585395:ECO103_RS01060-MONOMER; -.
DR   Proteomes; UP000000959; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; C8U1S0.
DR   SWISS-2DPAGE; C8U1S0.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000959};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662,
KW   ECO:0000313|EMBL:BAI29078.1};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        1     60       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
FT   COILED       70     90       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   304 AA;  33792 MW;  2E350FE060BBC271 CRC64;
     MKATSEELAI FVSVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL NRTTRQLSLT
     EEGERYFRRV QSILQEMASA ESEIMETRNT PRGLLRIDAA TPVVLHFLMP LIKPFRERYP
     EVTLSLVSSE TIINLIERKV DVAIRAGTLT DSSLRARPLF NSYRKIIASP DYISRYGKPE
     TIDDLKQHIC LGFTEPASLN TWPIARSDGQ LHEVKYGLSS NSGETLKQLC LSGNGIACLS
     DYMIDKEIAR GELVELMADK VLPVEMPFSA VYYSDRAVST RIRAFIDFLS EHVKTAPGGA
     VREA
//

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