(data stored in SCRATCH zone)

SWISSPROT: C8U1Z6_ECO10

ID   C8U1Z6_ECO10            Unreviewed;       284 AA.
AC   C8U1Z6;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   08-MAY-2019, entry version 68.
DE   SubName: Full=Predicted DNA-binding transcriptional regulator, ARAC-type {ECO:0000313|EMBL:BAI29154.1};
GN   Name=ykgD {ECO:0000313|EMBL:BAI29154.1};
GN   OrderedLocusNames=ECO103_0281 {ECO:0000313|EMBL:BAI29154.1};
OS   Escherichia coli O103:H2 (strain 12009 / EHEC).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=585395 {ECO:0000313|EMBL:BAI29154.1, ECO:0000313|Proteomes:UP000000959};
RN   [1] {ECO:0000313|EMBL:BAI29154.1, ECO:0000313|Proteomes:UP000000959}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=12009 / EHEC {ECO:0000313|Proteomes:UP000000959};
RX   PubMed=19815525; DOI=10.1073/pnas.0903585106;
RA   Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K.,
RA   Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M.,
RA   Hayashi T.;
RT   "Comparative genomics reveal the mechanism of the parallel evolution
RT   of O157 and non-O157 enterohemorrhagic Escherichia coli.";
RL   Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009).
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DR   EMBL; AP010958; BAI29154.1; -; Genomic_DNA.
DR   RefSeq; WP_000339593.1; NC_013353.1.
DR   EnsemblBacteria; BAI29154; BAI29154; ECO103_0281.
DR   KEGG; eoh:ECO103_0281; -.
DR   HOGENOM; HOG000136816; -.
DR   KO; K21746; -.
DR   OMA; CMDFELG; -.
DR   BioCyc; ECOL585395:ECO103_RS01475-MONOMER; -.
DR   Proteomes; UP000000959; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   InterPro; IPR032783; AraC_lig.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR011051; RmlC_Cupin_sf.
DR   InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR   Pfam; PF12852; Cupin_6; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   PRINTS; PR00032; HTHARAC.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF51182; SSF51182; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; C8U1Z6.
DR   SWISS-2DPAGE; C8U1Z6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000959};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696,
KW   ECO:0000313|EMBL:BAI29154.1};
KW   Transcription {ECO:0000256|SAAS:SAAS00048810};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00048643}.
FT   DOMAIN      177    278       HTH araC/xylS-type. {ECO:0000259|PROSITE:
FT                                PS01124}.
SQ   SEQUENCE   284 AA;  31504 MW;  18966E9C7BCA6040 CRC64;
     MDALSRLLML NAPQGTIDKN CVLGSDWQLP HGAGELSVIR WHALTQGAAK LEMPTGEIFT
     LRPGNVVLLP QNSAHRLSHV DNESTCIVCG TLRLQHSARY FLTSLPETLF LAPVNHSVEY
     NWLREAIPFL QQESRSAMPG VDALCSQICA TFFTLAVREW IAQVNTEKNI LSLLLHPRLG
     AVIQQMLEMP GHAWTVESLA SIAHMSRASF AQLFRDVSGT TPLAVLTKLR LQIAAQMFSR
     EMLPVVVIAE SVGYASESSF HKAFVREFGC TPGEYRERVR QLAP
//

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