(data stored in SCRATCH zone)

SWISSPROT: C8VMF9_EMENI

ID   C8VMF9_EMENI            Unreviewed;       331 AA.
AC   C8VMF9;
DT   03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT   03-NOV-2009, sequence version 1.
DT   30-AUG-2017, entry version 44.
DE   SubName: Full=Ribosome biogenesis protein, putative (AFU_orthologue AFUA_8G04790) {ECO:0000313|EMBL:CBF84958.1};
GN   ORFNames=ANIA_10200 {ECO:0000313|EMBL:CBF84958.1};
OS   Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL
OS   194 / M139) (Aspergillus nidulans).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.
OX   NCBI_TaxID=227321 {ECO:0000313|EMBL:CBF84958.1, ECO:0000313|Proteomes:UP000000560};
RN   [1] {ECO:0000313|Proteomes:UP000000560}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139
RC   {ECO:0000313|Proteomes:UP000000560};
RX   PubMed=16372000; DOI=10.1038/nature04341;
RA   Galagan J.E., Calvo S.E., Cuomo C., Ma L.J., Wortman J.R.,
RA   Batzoglou S., Lee S.I., Basturkmen M., Spevak C.C., Clutterbuck J.,
RA   Kapitonov V., Jurka J., Scazzocchio C., Farman M., Butler J.,
RA   Purcell S., Harris S., Braus G.H., Draht O., Busch S., D'Enfert C.,
RA   Bouchier C., Goldman G.H., Bell-Pedersen D., Griffiths-Jones S.,
RA   Doonan J.H., Yu J., Vienken K., Pain A., Freitag M., Selker E.U.,
RA   Archer D.B., Penalva M.A., Oakley B.R., Momany M., Tanaka T.,
RA   Kumagai T., Asai K., Machida M., Nierman W.C., Denning D.W.,
RA   Caddick M., Hynes M., Paoletti M., Fischer R., Miller B., Dyer P.,
RA   Sachs M.S., Osmani S.A., Birren B.W.;
RT   "Sequencing of Aspergillus nidulans and comparative analysis with A.
RT   fumigatus and A. oryzae.";
RL   Nature 438:1105-1115(2005).
RN   [2] {ECO:0000313|Proteomes:UP000000560}
RP   GENOME REANNOTATION.
RC   STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139
RC   {ECO:0000313|Proteomes:UP000000560};
RX   PubMed=19146970; DOI=10.1016/j.fgb.2008.12.003;
RA   Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J.,
RA   Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P.,
RA   von Dohren H., Doonan J., Driessen A.J., Durek P., Espeso E.,
RA   Fekete E., Flipphi M., Estrada C.G., Geysens S., Goldman G.,
RA   de Groot P.W., Hansen K., Harris S.D., Heinekamp T., Helmstaedt K.,
RA   Henrissat B., Hofmann G., Homan T., Horio T., Horiuchi H., James S.,
RA   Jones M., Karaffa L., Karanyi Z., Kato M., Keller N., Kelly D.E.,
RA   Kiel J.A., Kim J.M., van der Klei I.J., Klis F.M., Kovalchuk A.,
RA   Krasevec N., Kubicek C.P., Liu B., Maccabe A., Meyer V., Mirabito P.,
RA   Miskei M., Mos M., Mullins J., Nelson D.R., Nielsen J., Oakley B.R.,
RA   Osmani S.A., Pakula T., Paszewski A., Paulsen I., Pilsyk S., Pocsi I.,
RA   Punt P.J., Ram A.F., Ren Q., Robellet X., Robson G., Seiboth B.,
RA   van Solingen P., Specht T., Sun J., Taheri-Talesh N., Takeshita N.,
RA   Ussery D., vanKuyk P.A., Visser H., van de Vondervoort P.J.,
RA   de Vries R.P., Walton J., Xiang X., Xiong Y., Zeng A.P., Brandt B.W.,
RA   Cornell M.J., van den Hondel C.A., Visser J., Oliver S.G., Turner G.;
RT   "The 2008 update of the Aspergillus nidulans genome annotation: a
RT   community effort.";
RL   Fungal Genet. Biol. 46:S2-13(2009).
RN   [3] {ECO:0000213|PDB:4XD9}
RP   X-RAY CRYSTALLOGRAPHY (2.35 ANGSTROMS) OF 1-302.
RX   PubMed=25855814; DOI=10.1093/nar/gkv305;
RA   Asano N., Kato K., Nakamura A., Komoda K., Tanaka I., Yao M.;
RT   "Structural and functional analysis of the Rpf2-Rrs1 complex in
RT   ribosome biogenesis.";
RL   Nucleic Acids Res. 43:4746-4757(2015).
RN   [4] {ECO:0000213|PDB:5BY8}
RP   X-RAY CRYSTALLOGRAPHY (1.51 ANGSTROMS) OF 23-253.
RX   PubMed=26117542; DOI=10.1093/nar/gkv640;
RA   Kharde S., Calvino F.R., Gumiero A., Wild K., Sinning I.;
RT   "The structure of Rpf2-Rrs1 explains its role in ribosome
RT   biogenesis.";
RL   Nucleic Acids Res. 43:7083-7095(2015).
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DR   EMBL; BN001307; CBF84958.1; -; Genomic_DNA.
DR   PDB; 4XD9; X-ray; 2.35 A; A/C=1-302.
DR   PDB; 5BY8; X-ray; 1.51 A; A=23-253.
DR   PDBsum; 4XD9; -.
DR   PDBsum; 5BY8; -.
DR   SMR; C8VMF9; -.
DR   STRING; 162425.CADANIAP00008105; -.
DR   EnsemblFungi; CADANIAT00008105; CADANIAP00008105; CADANIAG00008105.
DR   HOGENOM; HOG000157782; -.
DR   InParanoid; C8VMF9; -.
DR   OMA; KIYMRSY; -.
DR   OrthoDB; EOG092C4SZT; -.
DR   Proteomes; UP000000560; Chromosome VII.
DR   GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR   GO; GO:0030687; C:preribosome, large subunit precursor; IDA:AspGD.
DR   GO; GO:0019843; F:rRNA binding; IBA:GO_Central.
DR   GO; GO:0003727; F:single-stranded RNA binding; IDA:AspGD.
DR   GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR   GO; GO:0000027; P:ribosomal large subunit assembly; IBA:GO_Central.
DR   GO; GO:0042255; P:ribosome assembly; IDA:AspGD.
DR   InterPro; IPR007109; Brix.
DR   Pfam; PF04427; Brix; 1.
DR   SMART; SM00879; Brix; 1.
DR   PROSITE; PS50833; BRIX; 1.
PE   1: Evidence at protein level;
DR   PRODOM; C8VMF9.
DR   SWISS-2DPAGE; C8VMF9.
KW   3D-structure {ECO:0000213|PDB:4XD9, ECO:0000213|PDB:5BY8};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000560};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000560}.
FT   DOMAIN       28    245       Brix. {ECO:0000259|PROSITE:PS50833}.
SQ   SEQUENCE   331 AA;  37090 MW;  7419E1CE9D6F9341 CRC64;
     MLREVKPKNP RTARILKAKE PQLIEGAKRV LLLHGSKCPT PLHTVLKVFH SLTTPHSVLF
     HKKNENIHPF ESTESLEFLA NKNDCGMVIF GSSNKKRPNC LTIARIFDSK VLDMAELLLL
     PDANGEGIPE MNRLSMHVAI GLRPLMLFSG SAWDDTTSTT HTMLKSMLVD LFKGETSDKI
     DVEGLQYALM VGAEEPTAGL APIIHLRWYK IVTKRSGHKL PRVELEEIGP KLDFKVGRIQ
     EAPRDVMKEA MKQGKKPNEE IKNKKNIGID LIGDKVGRVH LAKQDLGGLQ TRKMKGLKRR
     AGVESDDEGD ADMMDVDEVS EDEKTKRARH D
//

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